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NECEvent2014_4_3_Actinomyces_59_538_scaffold_18_28

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 31886..32509

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1QRT7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 207.0
  • Bit_score: 383
  • Evalue 1.10e-103
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachoma similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 207.0
  • Bit_score: 384
  • Evalue 9.10e-104
  • rbh
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 206.0
  • Bit_score: 327
  • Evalue 3.50e-87

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Taxonomy

Chlamydia trachomatis → Chlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 624
ATGTCGACGAATCGTTCACGGAAGCAGGTGCGCCAGTCACGCGCACTCGGAATCGCACTGACCCCGAAGGCTGTGCGTTACTTTGAGAAGCGCCCCTACGGCCCCGGCGAGCACGGCCGTACCCGCCGTCGCCAGGATTCCGACTACGCCGTTCGTCTGAAGGAAAAGCAGCGTCTGCGCGCACAGTACGGCATCCGCGAAGCTCAGATTCGCCGCATCTTCGAAGAAGCTCGCCGTCAGGACGGCCTGACCGGTGAAAACCTGGTTGAGCTGCTCGAAATGCGCATTGATGCTCTGGTTCTGCGTGCAGGATTTGCTCGCACCATCCAGCAGGCTCGCCAGGTGGTTGTACACCGTCACATCATGGTGGACGGCAAGATCGTTGACCGCCCCTCTTTCCGCGTGAAGCCCGGACAGACGATCCAAGTCAAGCCAAAGTCGCAGACCACTGTTCCGTTCGAGATCGCCGCCTCCGGCGTGCACCGCGATGTGCTGCCGGCAGTTCCGGATTACCTCGACGTTGAGCTGGAACGTCTCAAGGCCACACTGGTGCGACGCCCTAAGCGCGCTGAAGTTCCAGTGACCTGTGACGTCCAGATGGTCGTTGAGCACTACTCACGCTGA
PROTEIN sequence
Length: 208
MSTNRSRKQVRQSRALGIALTPKAVRYFEKRPYGPGEHGRTRRRQDSDYAVRLKEKQRLRAQYGIREAQIRRIFEEARRQDGLTGENLVELLEMRIDALVLRAGFARTIQQARQVVVHRHIMVDGKIVDRPSFRVKPGQTIQVKPKSQTTVPFEIAASGVHRDVLPAVPDYLDVELERLKATLVRRPKRAEVPVTCDVQMVVEHYSR*