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NECEvent2014_4_3_Actinomyces_59_538_scaffold_19_35

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(40197..40580)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W9E9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 126.0
  • Bit_score: 221
  • Evalue 4.50e-55
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 126.0
  • Bit_score: 221
  • Evalue 6.30e-55
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 127.0
  • Bit_score: 215
  • Evalue 9.00e-54

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGCACGTGTGAAAAGGTCTGTCAACGCCCGCAAGAAGCGTCGCACCACACTTGATCGCGCATCCGGATACCGTGGGCAGCGCTCACGCCTGTACCGTAAGGCAAAAGAGCAGGTCACTCACTCTTTCGTATACAGCTACCGTGACCGTAAGCGCCGCAAGGGTGACTTCCGTCGCCTGTGGATCCAGCGCATCAACGCTGCCGCACGCGCAAACGGCATGACGTACAACCGCCTCATTCAGGGTCTGAACCTTGCCGGCATCGAAATCGATCGCCGCATGCTGGCCGACCTGGCAGTCAACGACGCAAACGCCTTCGCAGCAATTGTGAAGACTGCCCGTGAAGCGCTGCCCGAAGACGTCAACGCTCCCAAGGCATCCTGA
PROTEIN sequence
Length: 128
MARVKRSVNARKKRRTTLDRASGYRGQRSRLYRKAKEQVTHSFVYSYRDRKRRKGDFRRLWIQRINAAARANGMTYNRLIQGLNLAGIEIDRRMLADLAVNDANAFAAIVKTAREALPEDVNAPKAS*