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NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_8

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(5108..6670)

Top 3 Functional Annotations

Value Algorithm Source
PspC family transcriptional regulator n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B4DE85 similarity UNIREF
DB: UNIREF100
  • Identity: 28.8
  • Coverage: 532.0
  • Bit_score: 171
  • Evalue 1.70e-39
PspC domain protein {ECO:0000313|EMBL:EJG15396.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.8
  • Coverage: 540.0
  • Bit_score: 163
  • Evalue 8.30e-37
PspC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 214.0
  • Bit_score: 123
  • Evalue 2.50e-25

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Taxonomy

Actinomyces sp. ICM47 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
GTGGACGTGAGGAGTCATGGCGGGCAGGCGGAATCCACCCGTTGTCGCGCTCACGATTGGCTGCTGTCACTGTTCTATCTTGGCATCAAAACCGCTCCGGACCGTGATTCTCAGCTTCTTTTCAGGGGGGAATCAGGGCTCTCCCCGATGGATGTGAACGACTCAGTCTGCCACAGTAGTTTCATGAGTTATTCAGCAGGCACACCCTTCACCGATCCCGGGTCCTCATCGTTTTTCGATTCCATCCGTCGGTCAGGCTGGTTTCGCGGTGAGGATCGCCTGGTCGGAGGCGTATGCGCCGGCATGTCTGCGCGCACTGGCTGGAATCTGGCATTCGTGCGAGCAATGGCGATTGTTCTGGGATTGCTGTGTTCCGTTTTCATCTTGCCTGCCTATGGACTGGCATGGGCTTTCCTGCCTGAGTACCGCGACGGCCGTATTCACTGTGAACAGCTGATCCGATTCGGCACATTCGATGTGGGGTTTGCGGGCGCACTGGTGACAACTCTGGTCGGACTGGCTTCCAGTGCTGCAGTGCCGTGGATCTACCCACTCGTCATTCTTGGCGCGATCATCCTGACCATTATGGCGATTGCCGGTGCGGTGCAGTACACGCGTAACCATCAGAAAGGCGCGCTACCACATGTGCCACCATCCAGCTATGTCCCCGCCAGCGCTCCTCGGCCTGTGAGTGCGCCAACACCATCTCCTGCCACCGGCACGCCGAACAATCCGTGGACGGTGCCACCTGCGCAGCGACCGGCCTCGCCCTCTGTGCCGATGCCGGCGAACCTGGCCATTACCGGCCTCATTGTCCTTGCTCTTGCAGCAGCGTGCGCGTTGGTCGTTCAGGAAGGTCTGGGCGGCGTGGATGCGGTACGCGTGTTCGTGGTTCTGACAGCGAGCGTTCTCGTGGGGCTCGGCATAGTCCTTGCGTTCACGGCTTTTCGAGGGCGTCGCGCGCCATGGCTGATCTGCCTGTCCGTTCTTGTGGCAGTATGCTCTCCACTTGTGCTGGCTGTGGGCTACGCCGAATACGAGCAGGAGCAATACCTGCAGACCCTGGAGAGCGAAGAACCGGGTATGGCAGAGGCAGACACGGCCGTGACATACGACTGGACTGCGACGCAATTATCCGACACTGGTTCAATCACTCTGGATCTTTCGCAGGCGCCGGCAGATGCGCTCAAGACGATCCGTCTGGACGATATTGGTGGCGATGTGACGATCGTGATGCGTCAAAATCAGCCGGTGGGGTTTCATCTGTATAGCTCGGTCGGTCTGATCCGCTCGGACTACTGGCTGGATGCACAAGGAGGCCGGGTGTCCAGCCCATGGATTCCGGAAGTGCAGTTCGTGTCAGAGGAACTGGCATTCCGCAATGATTTTTGGTCTCCTGAGCACGGGATCAACCTGGAAATCACCAATGTGTACGGCAGCGTCACCATCATCGAGTCTGCGCCTGCAGATATCTCCGGTGACACGATCCAGAGCGGCGACCTGTCTCAAAGCGGCGCACAGTCAGGAGACACTGCTCAATCATCTTCACGCAGCAATGGATAA
PROTEIN sequence
Length: 521
VDVRSHGGQAESTRCRAHDWLLSLFYLGIKTAPDRDSQLLFRGESGLSPMDVNDSVCHSSFMSYSAGTPFTDPGSSSFFDSIRRSGWFRGEDRLVGGVCAGMSARTGWNLAFVRAMAIVLGLLCSVFILPAYGLAWAFLPEYRDGRIHCEQLIRFGTFDVGFAGALVTTLVGLASSAAVPWIYPLVILGAIILTIMAIAGAVQYTRNHQKGALPHVPPSSYVPASAPRPVSAPTPSPATGTPNNPWTVPPAQRPASPSVPMPANLAITGLIVLALAAACALVVQEGLGGVDAVRVFVVLTASVLVGLGIVLAFTAFRGRRAPWLICLSVLVAVCSPLVLAVGYAEYEQEQYLQTLESEEPGMAEADTAVTYDWTATQLSDTGSITLDLSQAPADALKTIRLDDIGGDVTIVMRQNQPVGFHLYSSVGLIRSDYWLDAQGGRVSSPWIPEVQFVSEELAFRNDFWSPEHGINLEITNVYGSVTIIESAPADISGDTIQSGDLSQSGAQSGDTAQSSSRSNG*