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NECEvent2014_4_3_Actinomyces_59_538_scaffold_22_23

Organism: NECEvent2014_4_3_Actinomyces_59_538_plum

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 23198..24238

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W679_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 330.0
  • Bit_score: 409
  • Evalue 3.10e-111
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ENO18030.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 330.0
  • Bit_score: 409
  • Evalue 4.40e-111
  • rbh
periplasmic binding protein and sugar binding domain of the LacI family protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 330.0
  • Bit_score: 243
  • Evalue 8.40e-62

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
GTGTCCACGAACCCTCTGCGCGTTAAGAACGGACCACCCGCGAAGAACAAGCGAGTCTCGCTCGCAGACGTGGCGCGCCATGCCGGCGTGTCAGCCAACACGGTCTCGCGCGTGGTACGAGGCGACCCTGAAGTCGCAGATTCCACACGAGCGAATATCACCGCGCTGCTCCACGAGATGGGGTACCGGCCGAACTATGCGGCCAGGGCTCTTGCCGGCAAGCGTACAGGGGTCATCCATGTGCTGATGGCGGCGCCGATGTTCCACGGGCACGGCCAGACGTTGCTGCATGTGCTCAACGCTGCCAGCGATGCCGGTCTGAGCGTGTCGATTTCGAATGTCTACATGTCTGACGGGCACGTCACCAGTAACGCGATCCCATTTCGAGTCGACGGAATCGTCATTCTGGGCGGTCAGGACCCCGTCATCGAAATGGCGATGAAGCTGGCTCGCACAACGCCGACGACGCTGCTGCTGTCATCGGAAACGACTATCGATGGCGTATCGACCGTCTCTGTCGATAACGTGCTGGGCTCACGAGTCGCCACCGACCATCTGCTGCGTGGCGGAGTCACTGACATCGTTCACCTGATGGGGCCGGCAAGCTGGAACGACGCACATCAGCGGCGCAAGGGATTCGAAGAAGCGTGTGCGCAGTCCGACGCCTCTTTAAATGTCGAGATCATCGAATGTGGCTCGTGGAATGCGGTGGACGGATTCGATGCCACCTACAGCATGGGGCGCATCCCTCAGGGAATCGTCGCATCCAACGACCAGATTGCGCTGGGCGCCATGCGCGCCGTTCGCGAGCTCGGCGGAGAGCTCCCCCACGACACCCGCGTGGTCGGTTTTGACGATGAGGCGGGCGCGCAGTGCTTCTCGCCGCCGCTCACAACTATTCGACAGCCCTTTGACCGGGTGGGCCGCACGGCGATTCGTCAGATCGTCGACCTCATTGCCGGACGCCCACCGCAGGACTTCATCATTCCCCCCGAACTGGTCATTCGGACCAGCTCCCAAATTGTCACTCACTACGAATGA
PROTEIN sequence
Length: 347
VSTNPLRVKNGPPAKNKRVSLADVARHAGVSANTVSRVVRGDPEVADSTRANITALLHEMGYRPNYAARALAGKRTGVIHVLMAAPMFHGHGQTLLHVLNAASDAGLSVSISNVYMSDGHVTSNAIPFRVDGIVILGGQDPVIEMAMKLARTTPTTLLLSSETTIDGVSTVSVDNVLGSRVATDHLLRGGVTDIVHLMGPASWNDAHQRRKGFEEACAQSDASLNVEIIECGSWNAVDGFDATYSMGRIPQGIVASNDQIALGAMRAVRELGGELPHDTRVVGFDDEAGAQCFSPPLTTIRQPFDRVGRTAIRQIVDLIAGRPPQDFIIPPELVIRTSSQIVTHYE*