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NECEvent2014_4_3_scaffold_220

Alias: 174_003_scaffold_220

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_scaffold_220_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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61..495
DNA (435bp) protein (145aa)
Hemoglobin n=8 Tax=Clostridium perfringens RepID=H7CXY0_CLOPF
hemoglobin
Bacterial hemoglobin {ECO:0000313|EMBL:BAB81659.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
NECEvent2014_4_3_scaffold_220_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

971..1969
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPX4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT16254.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_4_3_scaffold_220_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2218..5904
DNA (3687bp) protein (1229aa)
cpdA; 2', 3'-cyclic nucleotide 2'-phosphodiesterase (EC:3.1.3.6 3.1.4.16)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CST4_CLOPF rbh
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT16315.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perf
NECEvent2014_4_3_scaffold_220_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6133..9669
DNA (3537bp) protein (1179aa)
cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase (EC:3.1.3.6 3.1.4.16)
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPX6_CLOPF rbh
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT16231.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_4_3_scaffold_220_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9817..10410
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CXX6_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16490.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_3_scaffold_220_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10638..11243
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=5 Tax=Clostridium perfringens RepID=RUVA_CLOPE rbh
ruvA; Holliday junction DNA helicase RuvA
NECEvent2014_4_3_scaffold_220_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11257..12297
DNA (1041bp) protein (347aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridial
Holliday junction ATP-dependent DNA helicase RuvB n=9 Tax=Clostridium perfringens RepID=RUVB_CLOP1 rbh
NECEvent2014_4_3_scaffold_220_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12319..13344
DNA (1026bp) protein (342aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=8 Tax=Clostridium perfringens RepID=QUEA_CLOP1 rbh
NECEvent2014_4_3_scaffold_220_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13368..14510
DNA (1143bp) protein (381aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=6 Tax=Clostridium perfringens RepID=TGT_CLOP1 rbh
NECEvent2014_4_3_scaffold_220_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14549..14818
DNA (270bp) protein (90aa)
Preprotein translocase subunit YajC n=9 Tax=Clostridium perfringens RepID=H7CXX1_CLOPF
yajC; preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EIA16485.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_4_3_scaffold_220_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15014..15154
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CXX0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25408.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_4_3_scaffold_220_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15224..16597
DNA (1374bp) protein (458aa)
AstB/chuR-related protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXW9_CLOPF rbh
Radical SAM domain protein {ECO:0000313|EMBL:EDS80397.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. J
astB/chuR-related protein
NECEvent2014_4_3_scaffold_220_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16695..17954
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=5 Tax=Clostridium perfringens RepID=H7CXW8_CLOPF rbh
secD; preprotein translocase subunit SecD rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_4_3_scaffold_220_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17947..18816
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=8 Tax=Clostridium perfringens RepID=H7CXW7_CLOPF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
secF; preprotein translocase subunit SecF
NECEvent2014_4_3_scaffold_220_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19016..19870
DNA (855bp) protein (285aa)
DHH domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXW6_CLOPF rbh
DHH domain-containing protein
DHH domain protein {ECO:0000313|EMBL:EDT16263.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;
NECEvent2014_4_3_scaffold_220_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19914..20432
DNA (519bp) protein (173aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=289380 species="Bacteria; Firmi
Adenine phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=APT_CLOP1 rbh
Displaying 16 items

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