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NECEvent2014_4_3_scaffold_82_1

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(50..799)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional activator tipA n=2 Tax=Clostridium perfringens RepID=Q0TU99_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 249.0
  • Bit_score: 486
  • Evalue 1.90e-134
  • rbh
transcriptional activator tipA similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 249.0
  • Bit_score: 486
  • Evalue 5.40e-135
Putative transcriptional activator tipA {ECO:0000313|EMBL:EDT23648.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 249.0
  • Bit_score: 486
  • Evalue 2.70e-134

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGTATAGAGTTAAGGAAGTTTCAGAATTAACAGGAATATCGGTTAGAATGCTACATCATTATGATAAAATAGGACTTTTAAGACCTACAGCTATAAGTGAATCTGGATATAGATTATATAATGACAATAATCTAAAGCTTATTCAACAGATATTAATTTACCGTGAATTGGATTTTTCTTTAAAAGAAATAAAAGAGATTTTAAGTGATAAAAATTTAGACTTAAAGGAAACCTTAAGGAGACAAAAACAATTCATAATAGATAAGAGAGATAGATTAAATAAAATAGTTGAGACCATAGAAAACACAATTAAAGATATGGAAGGGGAATTTATAATGAATAAAAAAGGTATGTTTGAAGGATTTGATATAGAAAAACACAATAAACTTTTTGAGGAAGAAGTAGAAAATAAGTATGGAAAAAGTGATGCTTATAAGGAGTCAAAGGAAAAAGCAAGTAAATATTCAAAAGAAGACTGGAATAATATAATCGGAGAAATAGATGATTTATATAAAAATTTAGCAGAACTGATGGATAGAGAGGTTTCAGATGAAGAGGTTCAGAGCTTAGTTCATCAGTGGAGAATGCTTATAAGTGAAAATTTCTACCAATGTAGTATTGAGATATTTAAAGGGCTTGCAGATATGTATATCTATGATGAAAGATTTACTAAGAATATAGATAAATATGGAGAAGGATTCACTAACTTTTTAAGTGAGGCAATGAATTATTATTGCAATAAAAATTAA
PROTEIN sequence
Length: 250
MYRVKEVSELTGISVRMLHHYDKIGLLRPTAISESGYRLYNDNNLKLIQQILIYRELDFSLKEIKEILSDKNLDLKETLRRQKQFIIDKRDRLNKIVETIENTIKDMEGEFIMNKKGMFEGFDIEKHNKLFEEEVENKYGKSDAYKESKEKASKYSKEDWNNIIGEIDDLYKNLAELMDREVSDEEVQSLVHQWRMLISENFYQCSIEIFKGLADMYIYDERFTKNIDKYGEGFTNFLSEAMNYYCNKN*