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NECEvent2014_4_3_scaffold_160_14

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 19830..20822

Top 3 Functional Annotations

Value Algorithm Source
3'-5' exoribonuclease YhaM {ECO:0000313|EMBL:EDT71806.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDT71806.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 330.0
  • Bit_score: 663
  • Evalue 1.60e-187
3'-5' exoribonuclease YhaM n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2U9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 330.0
  • Bit_score: 663
  • Evalue 1.20e-187
  • rbh
CMP-binding factor similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 330.0
  • Bit_score: 660
  • Evalue 2.80e-187

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 993
ATGGAAAGAAAGGATAGACTTATGGAAATACCGGTAAAAAAAATAGGTGAGTTCGTTAAAGGAGAAAGAGTCGAAGGTTTTTTTCTTTTAAAATCAGTTACTTTAAAAACTACTAATTCTGGTGGAAAAAAATATTTAGATTTAGTTTTAAGTGATAAAACTGGTGATATATTAGGTAAAGTATGGGAGATTAAACCTGAGCATGAAGAATTAAAAAGTAATACAGTATTTAAGATTAGAGGTACGGTGAATAGTTGGCAGGGAACTTTACAGTTAAAAGTAGAACATGCTAGCAAGGTTACTGAAGAAGATAATATAAACTTAGATGATTTTGTTCAGAGTGCGCCATATACTAGCGATGAAATGTTTAAGACTATAAAAGATACTGTTCATAATATGAATGATATAGATATAAAGAACATTCTAAATAGAGTTTTAGAGATTAATAAGGATAAACTTATGTACTATCCCGCAGCAAAGTCAAATCATCACTCTATAAAGGGTGGACTTTTATATCACATAACAACTATGTTAAAGTTAGCTGAGAATATTTGTGGAATATATGATTTCTTAAACAGAGATTTAGTTTATGCAGGGGTAATACTTCATGATATGGCTAAAATCAAAGAGATGTCTTCTAATGAAATGGGCATAGTAGATGAATATACTTTAGAGGGAACTTTACTTGGACATATTACTCAAGGAATAAAGGAAATTGAGGTAATAGGAAAAGACGTTAATGCAGATAGTAAGATTATAATGTTACTTCAACATATGGTCTTATCACATCACTATGAGCCTGAATACGGAAGTCCTGTTAAGCCTCTTATACCAGAAGCTGAGATGTTACATTATTTAGATGTAATGGATGCTAGAATGTACGATATGAAAAAGGCAATTAAGGAAACTAAGGAAAATGAATTCTCAGAAAGAATTTGGTCTTTAGATAGTAGAAGAATATACAATCACGGAATGTATGAAAAAAATAATTAA
PROTEIN sequence
Length: 331
MERKDRLMEIPVKKIGEFVKGERVEGFFLLKSVTLKTTNSGGKKYLDLVLSDKTGDILGKVWEIKPEHEELKSNTVFKIRGTVNSWQGTLQLKVEHASKVTEEDNINLDDFVQSAPYTSDEMFKTIKDTVHNMNDIDIKNILNRVLEINKDKLMYYPAAKSNHHSIKGGLLYHITTMLKLAENICGIYDFLNRDLVYAGVILHDMAKIKEMSSNEMGIVDEYTLEGTLLGHITQGIKEIEVIGKDVNADSKIIMLLQHMVLSHHYEPEYGSPVKPLIPEAEMLHYLDVMDARMYDMKKAIKETKENEFSERIWSLDSRRIYNHGMYEKNN*