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NECEvent2014_4_3_scaffold_328_2

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(827..1906)

Top 3 Functional Annotations

Value Algorithm Source
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61) similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 359.0
  • Bit_score: 725
  • Evalue 7.60e-207
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 359.0
  • Bit_score: 725
  • Evalue 3.80e-206
tRNA-specific 2-thiouridylase MnmA n=6 Tax=Clostridium perfringens RepID=MNMA_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 359.0
  • Bit_score: 727
  • Evalue 9.20e-207
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1080
GTGACAAAGAAAAAGGTTGTTATAGGTATGAGCGGCGGAGTTGATAGCTCCGTTGCTGCTTACCTTTTAAAGGAACAGGGATATGATGTAATTGGTGTTACAATGCAAATATGGCAAGAGGATAAGGAATATGAGGAAAGAGAAGGTGGATGTTGTTCACTGTCAGCAGTGGATGATGCTAGAAGAGTTGCTCAAAAACTAGATATTCCTTTTTACGTTTTAAACTTTAGAGATAGTTTTAAAAGAAACGTAATAGATTATTTTGTAGACGAATATATACAAGGTAGAACTCCAAATCCATGTATTGCATGTAACAAATATCTTAAATTTGATGAGCTTTTACAAAAAGCTAAAGGTATAGGTGCAGACTATGTTGCAACAGGTCACTATGCTAAAATTGAAGAAAGAGATGGAAGATTCCAACTTATAAGATCAAAGGATGATAGAAAAGATCAAACTTATGCTTTATACAATCTAACTCAAGAGCAGTTAGAGCATACTTTAATGCCTTGTGGAGAATTCACTAAGGATAAGATTAGAGAAATAGCTAAAGAGATCGGTCTAGATGTACATAATAAAAAGGACAGTGAAGAAATATGCTTTATTCCAGATAATAATCATGGAAGATACATATGTGAAGCTGCTCCAAACAAAGTTAGACCAGGAAACTTTGTTGATAAGTATGGAAATGTCTTAGGAAAACATAAAGGAATAGTCTATTATACAATAGGACAAAGAAAGGGCTTAGGATTAGCTCTTGGAAGACCAGTGTTTGTTACTGATATAAACCCTGTAACTAATACTGTTGTAGTAGGACCAGAAGAGGATATCTTTAAAACTGATTTAGTTTGTAAAAATATAAACTTCATATCTATAGATAAACTTGAAGGCCCTATGGAAGTTGAAGCTAAAATTAGATATTCAGCTAGACCAGCTAAGGCTACTATAAGTCCTATGGAAAATGGAAGAGTTAAAGTTTCTTTTGAAGATAAGCAAAGAGCTATAACTAAAGGTCAATCTGTTGTTTTCTATAAAGATGATTTAGTTGTAGGTGGAGGAATAATCGAAAGCCTACTTTAA
PROTEIN sequence
Length: 360
VTKKKVVIGMSGGVDSSVAAYLLKEQGYDVIGVTMQIWQEDKEYEEREGGCCSLSAVDDARRVAQKLDIPFYVLNFRDSFKRNVIDYFVDEYIQGRTPNPCIACNKYLKFDELLQKAKGIGADYVATGHYAKIEERDGRFQLIRSKDDRKDQTYALYNLTQEQLEHTLMPCGEFTKDKIREIAKEIGLDVHNKKDSEEICFIPDNNHGRYICEAAPNKVRPGNFVDKYGNVLGKHKGIVYYTIGQRKGLGLALGRPVFVTDINPVTNTVVVGPEEDIFKTDLVCKNINFISIDKLEGPMEVEAKIRYSARPAKATISPMENGRVKVSFEDKQRAITKGQSVVFYKDDLVVGGGIIESLL*