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NECEvent2014_4_3_scaffold_328_6

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(4142..5368)

Top 3 Functional Annotations

Value Algorithm Source
ATPase, AAA family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ72_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 408.0
  • Bit_score: 804
  • Evalue 5.20e-230
  • rbh
ATPase, AAA family {ECO:0000313|EMBL:EDS80345.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 408.0
  • Bit_score: 804
  • Evalue 7.30e-230
recombination factor protein RarA similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 408.0
  • Bit_score: 798
  • Evalue 1.00e-228

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1227
ATGCGTCCTAAAAAATTAGAGGATATAGTTGGACAGAAACACATTGTAGGAGAAGGAACTCCTTTAAACAAGCTTATAAAAAACAAGAACATAATGAATTGCATTTTTTATGGTCCACCTGGTGTTGGAAAAACTACTTTAGCTAATATAATTTCAAATTACACTGATAAGAAATTTTATAAAATAAATGCTACTACATCTTCCATAAAAGAAATACAAAGTATAACTTCTGATATAGATAATTTATTAAATTTTAAGGGAATAATACTGTATATAGATGAGCTTCAGCATTTTAATAAAAAACAGCAGCAAGCGCTTTTGGAATTTATTGAAGATGGGAGAGTAATATTAATAGCAAGTACTACAGAAAATCCATACTTTGCTATACATAAGGCGATACTAAGCAGAAGTACCATATTTCAATTTAAACCAGTAAGTACTGAAGATATAATAATAGCTTTAGAAAGAGCAGTAAGTAAACTTGAAAAAGAAGGATATGTTATTTCCCTTGAAGAAGGCGTTTTAAAATATATTGGAGAGATTTCTCAAGGAGATGTAAGAAAAGCTTACACAGTGTTAGAATTGGCTATTAAATCTCAAGAAAAAGATAATATCCTTTTAAATAAAGAGTATGTAGAAAACTTAGGGCAGTCTAATTTGAAATCTGATTCATCAGGAGATGATTATTATAATTTATTAAGTGCTCTTCAAAAAAGTATAAGAGGAAGTGACCCTGATGCCTCGATTCATTATTTAGCTAGACTTATTAAGGGTGGAAATATGGATAGCGTAATTAGGAGGATAGGAGTAATTGCAGCTGAAGACATAGGTCTTGCTCATCCTAATGCTTTGCAAGTAGTAAATAGCGGAATAGACCTTGCTTTGAAAATAGGAATGCCAGAAGCAAGAATAATATTATCTGAATTAGTAATATATTTAGCTACCTTACCTAAGTCAAATAGTGCGTATATGGCTATTGATGATGCTTTAAGAGATTTAGAAAGGAATAATGCGGGGGATGTGCCAAAACATTTAAAAGATGCTCATTATAGTGGAGCAAGCAATTTAGGTGTTGGTGGGTATTTATATCCCCATAATTATCCTAATAGTTATATAAATCAAGAATATATGCCTGAAAATATGAGAGGAAAAGAATATTATAAGCCTAAGGATAATAAATACGAAAGTAGTATAAAAGCCTACTGGAATAATGTAAAAAACAAATAG
PROTEIN sequence
Length: 409
MRPKKLEDIVGQKHIVGEGTPLNKLIKNKNIMNCIFYGPPGVGKTTLANIISNYTDKKFYKINATTSSIKEIQSITSDIDNLLNFKGIILYIDELQHFNKKQQQALLEFIEDGRVILIASTTENPYFAIHKAILSRSTIFQFKPVSTEDIIIALERAVSKLEKEGYVISLEEGVLKYIGEISQGDVRKAYTVLELAIKSQEKDNILLNKEYVENLGQSNLKSDSSGDDYYNLLSALQKSIRGSDPDASIHYLARLIKGGNMDSVIRRIGVIAAEDIGLAHPNALQVVNSGIDLALKIGMPEARIILSELVIYLATLPKSNSAYMAIDDALRDLERNNAGDVPKHLKDAHYSGASNLGVGGYLYPHNYPNSYINQEYMPENMRGKEYYKPKDNKYESSIKAYWNNVKNK*