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NECEvent2014_4_3_scaffold_378_9

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 9066..9962

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 298.0
  • Bit_score: 586
  • Evalue 1.70e-164
Pseudouridine synthase n=1 Tax=Clostridium perfringens F262 RepID=H7CZ18_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 588
  • Evalue 4.30e-165
  • rbh
ribosomal large subunit pseudouridine synthase f similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 298.0
  • Bit_score: 571
  • Evalue 2.00e-160

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 897
GTGAGAAAAGCATCAAAAAATAACAATAGAAGAAATAAGAGTTTATCTAATAAAAAGTTTAAGAGTGAAGATAAAAATTTAAATAAAACTAATAAAAATAAAAAACAAAAAGTAGCTAAAAAAGCTTCAGTAAAAAATACTATTATAGTATCAAATAAAAATGAGATAAGAGATGAAGTTAGATTAAATAAATATATAAGTGAAACAGGATTTTGCTCAAGGAGAGAGGCTGATAAGCTTATAGAACAAGGAAGAGTTAAGATAGATGGGGTAAAGGCTACAACTGGTATGAAGGTTTCAAAGGGGCAAAGTGTATTTATTGATGGAAAACCTCTAAAGGTTGAAAATGAACTAGTTTATATAGCTTTAAATAAGCCTGTTGGAATAACTTGTACTACTGAGAGCAAGATAAAAGGTAATATAGTTGACTTTATAAATCATGAAAAAAGAATTTTCCCAATAGGAAGACTAGATAAGGATTCTCAGGGATTAATATTTATGACTAATGATGGTGATATAGTTAATAAGATATTGAGAGCTGGTAATAATCATGAAAAAGAATATATTGTCACTGTAAATAAGCCTATAACTGATCATTTTATAAAAGGAATGAGCAATGGAGTGCCTATACTAGGAACAGTTACTAAGAAATGCTTAGTTAAGAAAGAAAGCAAAAACTCATTTAGAATAATATTAACTCAAGGGTTAAATAGACAGATAAGAAGAATGTGTGAGTATTTTGGATATGAGGTCAAAAAATTAGAAAGAATAAGAATAATGAATGTTAGCCTAGGAAACCTAAAAATGGGGTCTTGGAGATACTTAACTAAGAAAGAATTAGCTGAAATAAACAGATTAACAGAAAACTCTTCAAAGACTGAAGAGGCCTCAATTTAA
PROTEIN sequence
Length: 299
VRKASKNNNRRNKSLSNKKFKSEDKNLNKTNKNKKQKVAKKASVKNTIIVSNKNEIRDEVRLNKYISETGFCSRREADKLIEQGRVKIDGVKATTGMKVSKGQSVFIDGKPLKVENELVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIFMTNDGDIVNKILRAGNNHEKEYIVTVNKPITDHFIKGMSNGVPILGTVTKKCLVKKESKNSFRIILTQGLNRQIRRMCEYFGYEVKKLERIRIMNVSLGNLKMGSWRYLTKKELAEINRLTENSSKTEEASI*