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NECEvent2014_4_3_scaffold_422_4

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(3844..4380)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 176.0
  • Bit_score: 238
  • Evalue 1.40e-60
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:AGX42538.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AGX42538.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 176.0
  • Bit_score: 238
  • Evalue 6.90e-60
RNA polymerase factor sigma-70 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPV1_CLOSA similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 176.0
  • Bit_score: 238
  • Evalue 5.00e-60

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Taxonomy

Clostridium saccharobutylicum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 537
ATGAGAGATAATGACTTAATAAAACAACTAAAAAAGAAAAATCCCAAAGCTTTAGATTATATTTTTAATAAGTATGGGAATCTAATCTTTAAAGTATCATATTCTATTTTGAATAATAGGACACTTAGTGAGGAATGTGTCAATGATGTATTGCTTAAAATTTGGAACAACATAGATTCCTTTAATAAAAGTGATGAAAAATTTAAGGCTTGGATAATAGTTATGACTAAATACACATCTATAGATATGCTACGTAAAGAAAAAAAACATAATGATAATTTAAGCTTAGAATCTTATGATAACAAAGATACTACTCTTGAATCATCTTTAGAAAGTAAGGAAATAAAAGAAAAAATACTTTTTGCTATAAAAACTTTTGATAAGAAAAATAAAGAAATTTTCATAAAACGTTTTTTTCTTAACTACTCCATTAAAGAAATAAGCGAGTCAATTGGAATTAGTGAAAATGCTATAAGTAATAGAATACGTAGAGGAAAACTTAAACTTTCAGAGCTGTTGAGTAAGGAGGGTTTTTAA
PROTEIN sequence
Length: 179
MRDNDLIKQLKKKNPKALDYIFNKYGNLIFKVSYSILNNRTLSEECVNDVLLKIWNNIDSFNKSDEKFKAWIIVMTKYTSIDMLRKEKKHNDNLSLESYDNKDTTLESSLESKEIKEKILFAIKTFDKKNKEIFIKRFFLNYSIKEISESIGISENAISNRIRRGKLKLSELLSKEGF*