ggKbase home page

NECEvent2014_4_3_scaffold_177_16

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(17597..18493)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Clostridium perfringens RepID=B1BP47_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 591
  • Evalue 5.00e-166
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDT16442.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 298.0
  • Bit_score: 591
  • Evalue 7.10e-166
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 298.0
  • Bit_score: 589
  • Evalue 7.00e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 897
ATGAATTTAACTTATCTTAGATCTTTCTATACAACAGTTAAGTGTAATAGTATTTCTAAAGCTGCGAAACAATTGCATTTAACTCAACCAGGAGTTAGTATGCAAATTCAAAAACTTGAAAATGATATAAACTTTAAACTTTTAAATAGAAGTAATACTGGAGTAAGTTTAACAAGTGCTGGTGAAATAATCTTTGAATTTGCTGAATCAATGTTATCCATAGAAGATAACTTACAAAAAAAATTAGATGAATTAAAAAATATTAATTCAAAACTTATTATTTCTTGTTGTAAAAGTTTAGGTGAGCATGTAATGCCTTGCAGTATATATACATTTAAAGAAATTCATTATAAGACTGATATCTCTATGGAAATAGATAATACCTCAGATATATTAAAAAAATTAACTAATCATGAAACAAATATAGGCATTATTCAAGGTAAACCTAGTGATTGTAAAAACTTAGAACTTATTCCATTGATGACTGATAATCTAGTTTTAGTTGGTGGTAGAAATACTTCATTTAAATCAGTAAATGTTGAAGAACTTTATAAACTTCCTTTAATAACAAGAGAAGATGGATCAGCTAATAAATTATTGGTAGAATCAAGCTTAAAGAAAAATAAAATTAATATAGATAATCTTAATTTTGTTTTATCACTTAATTCTCCTCAATCAATAAAATCTTCTGTATCTTTTGGACAAGGATATTCATTTTTACCTGCAATTTCTTTAAACCATGAATTGAGAAGTGGTGAATTAAAGAAAATCGATATAAATGATTTAAAACTGCCTTTCCAATACTATATTGCACTTAGAAAAAACTATAAATTAGATTATTATGAACAAAAATTTGTAGATTTTCTAACATCAAAAAAAAGATGCTTTTGCTATTAA
PROTEIN sequence
Length: 299
MNLTYLRSFYTTVKCNSISKAAKQLHLTQPGVSMQIQKLENDINFKLLNRSNTGVSLTSAGEIIFEFAESMLSIEDNLQKKLDELKNINSKLIISCCKSLGEHVMPCSIYTFKEIHYKTDISMEIDNTSDILKKLTNHETNIGIIQGKPSDCKNLELIPLMTDNLVLVGGRNTSFKSVNVEELYKLPLITREDGSANKLLVESSLKKNKINIDNLNFVLSLNSPQSIKSSVSFGQGYSFLPAISLNHELRSGELKKIDINDLKLPFQYYIALRKNYKLDYYEQKFVDFLTSKKRCFCY*