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NECEvent2014_4_3_scaffold_216_22

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(17380..17850)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDH1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 156.0
  • Bit_score: 303
  • Evalue 1.10e-79
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 156.0
  • Bit_score: 304
  • Evalue 1.80e-80
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDT27880.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 156.0
  • Bit_score: 304
  • Evalue 9.00e-80

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 471
TTGACTACTAAAAGAATTGTAGAGACTGCTACTAAAGATACAAATAATAAAGAATTTTTACTTGATTTATATGCACAAGAAATAACTTATAGCCTATTAAATACTAAGGGAGCTAAAGATATTATTTCTAGTGATTTTAATAATCCAATAAATCGTTCTATTCAGATAATGAAAGGAAATCTTAAAAATAATATAACAGTTTCAGAAATTGCTTATAACCTAAATATGTCTCTTCCAAGCTTTTCTTCAAAGTTTAAAAAAGCTATGGGAATGACTCCTAATGATTACCTTACAAGCTTAAAACTTAATGAGGCTGCAAGACTTCTTAAGTTTTCATCAGTTACAGAGGTGGCTTATGATTTAGGATATGAAAATATTTCTCACTTTATAAAATTATTTAAAAAGAAGTTTGGATTAACACCTAAACAATATTCCTTAAAGTATTCTGGAGAAGTCATACAAATTCAATAG
PROTEIN sequence
Length: 157
LTTKRIVETATKDTNNKEFLLDLYAQEITYSLLNTKGAKDIISSDFNNPINRSIQIMKGNLKNNITVSEIAYNLNMSLPSFSSKFKKAMGMTPNDYLTSLKLNEAARLLKFSSVTEVAYDLGYENISHFIKLFKKKFGLTPKQYSLKYSGEVIQIQ*