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NECEvent2014_4_3_scaffold_230_12

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 12772..13428

Top 3 Functional Annotations

Value Algorithm Source
HD domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPP5_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 437
  • Evalue 8.90e-120
  • rbh
HD domain protein {ECO:0000313|EMBL:EDS78785.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 218.0
  • Bit_score: 432
  • Evalue 4.00e-118
poly A polymerase similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 218.0
  • Bit_score: 431
  • Evalue 1.40e-118

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 657
ATGAAGGATAAAGAATTATTTGAAATTTTAGAAAAGCATATTTTAGAGGATAAGAATCCATCAGAATTTTTAAATTATTTAAAGGAAAAGAAGCTTTTAGAAGGCTCTTTTTTAGAAATATTAAGGGATTTAGAAGAGGTTAAGCAGGAGAAAAAACACCACCCAGAAGGAAATGTATGGATTCATACAATGCAAGTTTTAGATGAAGCAGCAAATTTAAGAGAGCTTGCTAATAATAAAAGAGAATTTATGTGGTCAGCTTTACTTCATGACATTGGAAAGAGAGATACTACTAAGATGAGAAAGGGAAGATGGACTGCTTATGACCATGATAGGGTAGGAGCGAAACTTTCAAAAGAAATATTAGAAGAGGCTACTGATAATGAGAAATTTATAAGTGAAGTAAGCAGTTTAGTTAGATATCATATGTCTTATCTTTATATAGATAAAAATTTACCCTTTGTAAAAGCAGAAGATATGGTTAAAAATTCAGATCTTCATGATATAGCTTTATTGACTTATTGTGATAGAGTTGGAAGAGGGAAAAAGACTTTAGAAGATAAGAAAAAAATATTAGATTCAATAAATAATTTTATAGTTAAAGTCAATGAGAAAACTAAGAGTAACTATGAAAAATTATATGTTTTGGGAAAATAA
PROTEIN sequence
Length: 219
MKDKELFEILEKHILEDKNPSEFLNYLKEKKLLEGSFLEILRDLEEVKQEKKHHPEGNVWIHTMQVLDEAANLRELANNKREFMWSALLHDIGKRDTTKMRKGRWTAYDHDRVGAKLSKEILEEATDNEKFISEVSSLVRYHMSYLYIDKNLPFVKAEDMVKNSDLHDIALLTYCDRVGRGKKTLEDKKKILDSINNFIVKVNEKTKSNYEKLYVLGK*