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NECEvent2014_4_3_scaffold_863_4

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 1840..2454

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=8 Tax=Clostridium perfringens RepID=RL4_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 401
  • Evalue 5.10e-109
  • rbh
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 401
  • Evalue 1.40e-109
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 401
  • Evalue 7.10e-109

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 615
ATGCCTAAAGTAGGTTTATTTAATAAAGAAGGACAACAAGTTGGAGATATCCAATTAAATGAGCAAGTATTCGGAGTAGAAGTAAACAAATATGCTTTACACCAAGTAGTAGTAGCTCAATTAGCTAACAAGAGACAAGGTACTCAATCAGCTAAAACAAGATCTGAGGTAAGAGGAGGCGGAATCAAGCCTTGGAGACAAAAAGGAACAGGTAGAGCAAGACAAGGTTCTATCAGAGCGCCTCAATGGATCAAAGGTGGAGTTGTATTTGCACCAAAACCAAGAGATTACAGAATGTCAATACCAAAGAGCATGAGAAAAGTAGCTATGACTTCTGCTTTAACTAGCAAAGTTGCAGATATGGTTGTTTTAGAAGACTTAACTTTCGAAGCTCCAAAAACTAAGGAAGCAGTTAAAATGTTAAATGCTTTCGAAGCTAAGAAGACATTAATAATAACAGCTGAAGTTAATGAAAATGTATATAAATCAGCAAGAAACATAGAAGGTGTAACAGTTATGCCTGTTAACAACATCAATGTTTATGATTTATTAAACTGCAAAACATTAATGATAACTAAAGAAGCTGTAAACAAAATTGAGGAGGTGTACGCATAA
PROTEIN sequence
Length: 205
MPKVGLFNKEGQQVGDIQLNEQVFGVEVNKYALHQVVVAQLANKRQGTQSAKTRSEVRGGGIKPWRQKGTGRARQGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVADMVVLEDLTFEAPKTKEAVKMLNAFEAKKTLIITAEVNENVYKSARNIEGVTVMPVNNINVYDLLNCKTLMITKEAVNKIEEVYA*