ggKbase home page

NECEvent2014_4_3_scaffold_516_3

Organism: NECEvent2014_4_3_Clostridium_perfringens_28_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(2184..3164)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 326.0
  • Bit_score: 656
  • Evalue 2.00e-185
tRNA-dihydrouridine synthase n=10 Tax=Clostridium perfringens RepID=H7CZH2_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 326.0
  • Bit_score: 656
  • Evalue 1.40e-185
  • rbh
putative dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 326.0
  • Bit_score: 656
  • Evalue 3.90e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 981
ATGAAAATATCAAACATAGTTTTAGAAAATAATGTTTTCTTAGCACCTATGGCAGGGGTTACAGATATATCTTTTAGGGGATTATGTAAAGAGATGGGTGCAGGAATTGTTTGCACTGAAATGGTTAGTGCAAAGGCATTGTACTATGGGAGTGAAAATACAAAAGAATTAATGAGAATTGCAGATGAAGAAAAACCGGTATCTTGTCAGATGTTTGGAAATGATTCAGAGATAATGGCTTATGTCACTGAGAAGCATTTTAATACAAATGATGATATATGTATAATAGATGTTAATATGGGATGTCCTGCACCTAAGATAGTAAAAAATGGTGAAGGTTCAGCCTTAATGAAAAATCCTAAATTAGCTTATGAGATCATGAATAGCATAAAAAAAGTTGCAACAAAGCCTGTAACAGTTAAGTTTAGAATGGGTTTTGATGAAGAAAATATAAATGCTGTTGAGTTTGCTAAAATCATGGAAGAAGCAGGAGTAGATGCTATTGCTGTACATGGAAGAACTAGAGCTCAAATGTATGAAGGAAAAGCTAATTGGGATATAATAAGACAAGTGAAAGAAGCAGTTAATATTCCTGTTATAGGAAATGGAGATGTATTTACTGCGGAGGATGCTTTAAGTCTTAAAAATCAAACTAACTGTGATGGAATTATGGTTGCAAGAGGAAGTATGGGAAACCCATGGATCTTCAAGCAAATAGTTCAGAAATTAAATGGAGAAGAGGTTTATATGCCTACTCCAGAAGAAAAAATAGATATGTGTATAAGACACTATAATTTATCACTTAAATATGATGGAGAGTATAAGGCTGTAAGAGAAATGAGAAAACATGCAGCTTGGTATATAAAAGGATTAAATAATTGTACTGAAGTTAAGAATAGGCTTAATTTAGAAGCTAATCCAGAGAAGATTATGGGTATCCTTAATGAGTATAAAGAATATTTAATGAAAAATGATTTATAA
PROTEIN sequence
Length: 327
MKISNIVLENNVFLAPMAGVTDISFRGLCKEMGAGIVCTEMVSAKALYYGSENTKELMRIADEEKPVSCQMFGNDSEIMAYVTEKHFNTNDDICIIDVNMGCPAPKIVKNGEGSALMKNPKLAYEIMNSIKKVATKPVTVKFRMGFDEENINAVEFAKIMEEAGVDAIAVHGRTRAQMYEGKANWDIIRQVKEAVNIPVIGNGDVFTAEDALSLKNQTNCDGIMVARGSMGNPWIFKQIVQKLNGEEVYMPTPEEKIDMCIRHYNLSLKYDGEYKAVREMRKHAAWYIKGLNNCTEVKNRLNLEANPEKIMGILNEYKEYLMKNDL*