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NECEvent2014_4_4_scaffold_231

Alias: 174_004_scaffold_231

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_231_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(294..869)
DNA (576bp) protein (192aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ABZ7_CLOBU rbh
Putative sporulation protein YyaC {ECO:0000313|EMBL:EEP52445.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
yyaC3; putative sporulation protein YyaC
NECEvent2014_4_4_scaffold_231_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(926..2077)
DNA (1152bp) protein (384aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJZ87028.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJZ87028.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
csd3; cysteine desulfurase Csd (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSA1_CLOBU rbh
NECEvent2014_4_4_scaffold_231_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2131..2778)
DNA (648bp) protein (216aa)
LysE type translocator n=4 Tax=Clostridium butyricum RepID=B1QSP3_CLOBU rbh
Translocator protein, LysE family {ECO:0000313|EMBL:KJZ87030.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
putative threonine efflux protein
NECEvent2014_4_4_scaffold_231_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2931..3170
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFL3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF3343
NECEvent2014_4_4_scaffold_231_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3194..4096
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1E5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30293.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
mechanosensitive ion channel family protein
NECEvent2014_4_4_scaffold_231_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4096..4290
DNA (195bp) protein (65aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QSP6_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP52436.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_4_scaffold_231_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4392..4679
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=4 Tax=Clostridium butyricum RepID=B1QSP7_CLOBU
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpsF; 30S ribosomal protein S6
NECEvent2014_4_4_scaffold_231_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4693..5145
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=4 Tax=Clostridium butyricum RepID=B1QSP8_CLOBU rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=997898 species="Bacteria; Firmicutes; Clostrid
single-strand binding protein
NECEvent2014_4_4_scaffold_231_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5174..5431
DNA (258bp) protein (86aa)
30S ribosomal protein S18 n=4 Tax=Clostridium butyricum RepID=B1QSP9_CLOBU
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
rpsR; 30S ribosomal protein S18
NECEvent2014_4_4_scaffold_231_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5705..6034
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QSQ0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93292.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
MazG-like family
NECEvent2014_4_4_scaffold_231_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6055..7992
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC06_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30299.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
phosphoesterase domain-containing protein
NECEvent2014_4_4_scaffold_231_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7995..8441
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=4 Tax=Clostridium butyricum RepID=B1QSQ2_CLOBU
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rplI; 50S ribosomal protein L9
NECEvent2014_4_4_scaffold_231_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8454..10349
DNA (1896bp) protein (632aa)
lon3; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease, Lon family n=3 Tax=Clostridium butyricum RepID=B1QSQ3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_4_scaffold_231_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10498..11823
DNA (1326bp) protein (442aa)
dnaC; replicative DNA helicase DnaC (EC:3.6.4.12)
Replicative DNA helicase n=2 Tax=Clostridium butyricum RepID=M8JFM2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_4_scaffold_231_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11947..12300)
DNA (354bp) protein (118aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ85049.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ85049.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1F2_CLOBU
hypothetical protein
NECEvent2014_4_4_scaffold_231_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12446..13246
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
proC2; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=4 Tax=Clostridium butyricum RepID=B1QSQ5_CLOBU rbh
NECEvent2014_4_4_scaffold_231_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13660..14835)
DNA (1176bp) protein (392aa)
NAD-dependent malic enzyme (EC:1.1.1.38)
NAD-dependent malic enzyme n=2 Tax=Clostridium butyricum RepID=M8K939_CLOBU rbh
Malate dehydrogenase {ECO:0000313|EMBL:ENZ30305.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_4_scaffold_231_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15169..16455
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
purA; adenylosuccinate synthetase PurA (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridium butyricum RepID=C4IMU0_CLOBU rbh
NECEvent2014_4_4_scaffold_231_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16554..16736
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JEB9_CLOBU
Disulfide oxidoreductase {ECO:0000313|EMBL:KHD13921.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hybrid cluster protein-associated redox disulfide domain protein
NECEvent2014_4_4_scaffold_231_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17348..18334
DNA (987bp) protein (329aa)
Bile acid:sodium symporter n=2 Tax=Clostridium butyricum RepID=M8JFM8_CLOBU rbh
Sodium-dependent transporter {ECO:0000313|EMBL:KJZ87006.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Predicted Na+-dependent transporter
NECEvent2014_4_4_scaffold_231_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18587..19345
DNA (759bp) protein (253aa)
Acyl-acyl carrier protein thioesterase {ECO:0000313|EMBL:KJZ87008.1}; EC=3.1.2.14 {ECO:0000313|EMBL:KJZ87008.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
Acyl-ACP thioesterase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K942_CLOBU rbh
acyl-ACP thioesterase
NECEvent2014_4_4_scaffold_231_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19413..20660)
DNA (1248bp) protein (416aa)
NAD n=4 Tax=Clostridium butyricum RepID=B1QU72_CLOBU rbh
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:EEP52431.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
HI0933 family protein
NECEvent2014_4_4_scaffold_231_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20903..21469
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEC4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI91968.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_4_4_scaffold_231_trna_1
unknown

Not on your lists

21633..21704
DNA (72bp)
transferRNA
Displaying 24 items

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