ggKbase home page

NECEvent2014_4_4_scaffold_250_5

Organism: NECEvent2014_4_4_Clostridium_butyricum_28_46

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 4701..6557

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 610.0
  • Bit_score: 842
  • Evalue 9.60e-242
ABC transporter, ATP-binding/permease protein n=2 Tax=Clostridium butyricum RepID=B1QSV1_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 618.0
  • Bit_score: 1199
  • Evalue 0.0
  • rbh
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:EEP52956.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 618.0
  • Bit_score: 1199
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1857
ATGAGTAATGAAGATAGAAAAATGAGACCTACCATGGGCGGCATGGGACAAATGAGAGGTATGGGTGGAGGAAAAGTAAAGGCAAAGAATTTTAAGGGAAGCATGAAAAAGCTCTTTAATTATTTATTTAAATATAAATTTTCAGTTATTTTGGTTATATTCTTTGCAATAGGAAGTACTGCATTTTCAATAATAGGTCCTAAAATTTTAGGTAATGCTACTACAGAAATATTTAATGGAATAATGAGCAAACTTTCTGGTGGAAGTGGAATAGATTTTACTAAAATAAGTAGAATCTTAATTACATTACTAGTCATATATTTAATAAGTGCAGTATTTTCATTTATTCAGGGATTTATAATGACAGGAGTTTCTCAAAAGCTTACATATAGATTAAGAAAAGAAATGATAGAAAAAATAGATAGAATGCCTATGAACTATTTCGATAGGAGAACACATGGTGAAGTTTTATCGAGAATAACAAATGATATAGATACATTAAATCAGAGTCTTAATCAGAGTATGACTCAGATAATAACATCAATAACAACAATAATTGGAATTGTATTTATGATGTGCACAATAAATGTGATAATGACTTGTACCATAGTATTGATAGTTCCAATATCCCTTATATTTATAACTTTTATAGCAAAAAAATCACAAAAATATTTTAAGGAACAGCAGGATTATTTGGGTCATGTAAATGGGCAGGTTGAAGAAGTTTATGGTGGACATAATATTGTAAAAGTATTTAATGGAGAGGAGGATGCAATAAATAGATTCAATACTGACAATGAAACACTTTATAAAAGTGCATGGAAATCACAATTTTTATCTGGTCTTATGCAGCCTATAATGATGTTTATAAGTAATATTGGTTATGTTGCAGTTGCAATTCTCGGAGGTTTTTTTGCAATACAAAATAAAATAAGTGTTGGAGATATACAGTCATTTATCCAATATACAAGAAGTTTTACTCAGCCACTTGCTCAGATTGCTCAAATATCAAATATGCTTCAGTCTATAGCAGCATCTTCTGAAAGGGTTTTTGAATTCTTAGAAGAAGAAGAAGAGGTTCAATTTGCAGATAATCCAGAAAGTATTGAAAATATTGAAGGAAACGTAGAATTTAGAAATGTTAAATTTGGATATTATCCAGATAAAACAATAATCAATAATTTTAGTCTTAAAGTAAATGAAGGTAAAAAAGTGGCTATTGTAGGACCTACTGGAGCTGGTAAGAGTACAATTATAAAGATACTTATGAGATTTTATGATATAAATAATGGTGATATACTTATTGATGGGAAAAGTATATACAATTTTAATAGAAGAGATCTTAGGAAACTTTTTGGAATGGTCCTTCAAGAAACATGGCTATTTAATGGATCAATAAAGGAAAATATAAGATATGGAAATCTTGATGCATCTGATGAAGAAGTACATAATGCAGCTGAAAGTGCAGAAGCAGATGAATTTATAAGTACATTTCATGAAGGCTACGATATGATTTTAAATGAAGAAGTAAGCAATGTATCTCAGGGACAAAAGCAGCTTTTAACAATTGCACGTGCAATACTTAAAGATCCTAAAATATTGATACTTGATGAAGCAACAAGTTCAGTAGATACAAGAACAGAATTGAAAATTCAAAAAGCCATGGATACACTTATGGAAGGAAGAACAAGTTTTATAATAGCACATAGACTTTCAACAATAAAAAATGCAGATATAATTCTTGTTTTAAAGGATGGAGATATTATTGAGCAGGGTAATCATGAAGAGCTCATGGCTATGAATGGATTTTATACTAATTTATATAATTCTCAGTTTGAAAAAACAGCAGCAAATTAA
PROTEIN sequence
Length: 619
MSNEDRKMRPTMGGMGQMRGMGGGKVKAKNFKGSMKKLFNYLFKYKFSVILVIFFAIGSTAFSIIGPKILGNATTEIFNGIMSKLSGGSGIDFTKISRILITLLVIYLISAVFSFIQGFIMTGVSQKLTYRLRKEMIEKIDRMPMNYFDRRTHGEVLSRITNDIDTLNQSLNQSMTQIITSITTIIGIVFMMCTINVIMTCTIVLIVPISLIFITFIAKKSQKYFKEQQDYLGHVNGQVEEVYGGHNIVKVFNGEEDAINRFNTDNETLYKSAWKSQFLSGLMQPIMMFISNIGYVAVAILGGFFAIQNKISVGDIQSFIQYTRSFTQPLAQIAQISNMLQSIAASSERVFEFLEEEEEVQFADNPESIENIEGNVEFRNVKFGYYPDKTIINNFSLKVNEGKKVAIVGPTGAGKSTIIKILMRFYDINNGDILIDGKSIYNFNRRDLRKLFGMVLQETWLFNGSIKENIRYGNLDASDEEVHNAAESAEADEFISTFHEGYDMILNEEVSNVSQGQKQLLTIARAILKDPKILILDEATSSVDTRTELKIQKAMDTLMEGRTSFIIAHRLSTIKNADIILVLKDGDIIEQGNHEELMAMNGFYTNLYNSQFEKTAAN*