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NECEvent2014_4_4_scaffold_34_24

Organism: NECEvent2014_4_4_Anaerococcus_vaginalis-rel_29_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(21305..22189)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 294.0
  • Bit_score: 570
  • Evalue 1.30e-159
tRNA pseudouridine synthase B n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSS9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 294.0
  • Bit_score: 570
  • Evalue 9.10e-160
  • rbh
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 295.0
  • Bit_score: 297
  • Evalue 3.20e-78

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Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGACTAGTGGAATTTTGTTAATTGATAAAAGTACAGGAATGTCATCAGGAAAATGTGTATATCAAGCAAGAAAAAAACTAGGCATAAAAAAAATAGGCCATGCAGGAACTCTTGATCCTCTTGCAACTGGTCTTTTGCCACTTTTAATTAACAAAGCAACAAGAGTTTCAGATTTTTTAATGGATGAGGTTAAAATCTATGAAACTCTTGCATTTTTTGGGCAAAAAACAGATACCCAAGATATTACAGGGGAAATTTTAGAAAAATCTTCAAAAACTTTTGAAAAAAAAGATTTGGAAAAGGCAATAAAAGAAAATTTTTTGGGAGAAATTTTCCAAACTCCTCCTATGTATTCAGCTTTAAAACAAAATGGCAAAAAATTATATGAGCTTGCAAGAGAAGGAAAAATTGTAGAAAGAAAACAAAGAAGAATTAAAGTTTATGATTTTGAAATCCTAGATTTTGATTTTCCTTATGCAAGATTTAAAATAACTTGTTCAAAAGGAACCTATATAAGAAGTCTTGTAAATGATTTGGGAGAAGTTTTAAAATCATTTGCCACAGTAAAAGAACTTAGAAGGCTTAAAGTTGGAAATTTTGATGTAAAAGATGCCATAAAAATTGAAGATTTTGAAAAAAAAGATCTTGATAAGCTTTTAAAAAAGCTTATTCCAATTGATGATGCCCTAAATCAATATGAAAAAATAATTTTGGATAAGTCTTATTACAAACAAGCTACAAATGGGATGACTATGAAAATTGATCTTGGAAAAAATTTTGATGGACTTATTAGAGTTTATGTAGAAGATTTATTCATTGGGCTTGGAGAATATAAAAATAAAAACAAGACTTTGAAGTTAAAGAAGGTGTTTTATGAAGGATAA
PROTEIN sequence
Length: 295
MTSGILLIDKSTGMSSGKCVYQARKKLGIKKIGHAGTLDPLATGLLPLLINKATRVSDFLMDEVKIYETLAFFGQKTDTQDITGEILEKSSKTFEKKDLEKAIKENFLGEIFQTPPMYSALKQNGKKLYELAREGKIVERKQRRIKVYDFEILDFDFPYARFKITCSKGTYIRSLVNDLGEVLKSFATVKELRRLKVGNFDVKDAIKIEDFEKKDLDKLLKKLIPIDDALNQYEKIILDKSYYKQATNGMTMKIDLGKNFDGLIRVYVEDLFIGLGEYKNKNKTLKLKKVFYEG*