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NECEvent2014_4_4_scaffold_22_101

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(104938..105639)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=11 Tax=Clostridium perfringens RepID=H7CXG3_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 453
  • Evalue 9.80e-125
  • rbh
sigK; sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 453
  • Evalue 2.80e-125
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 453
  • Evalue 1.40e-124

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGTTCATGTTACAATACTTATTAGAATTAGTTGGTAGTAAAATATTTTTAACTGGCTATGTAACAGGAAATTCTACTTTTCCAAAGCCTTTAAATGAGAAGGAAGAAAAAATCTATTTAGAAAGATTAAAAGATGGAGATGTTGAGGCAAAAAGAGTACTAGTTGAGCGGAATTTAAGACTAGTAGCACATATAGTTAAGAAATATTCTTCAAATTATCAAAACTCAAAAGAAATGGATGATTTAATATCTATAGGAACAATAGGTTTAATAAAGGCTATAGATTCTTTTGACACTAACAAGGGAATACGACTTGCAACATATGCAGCTAAGTGTATAGACAATGAAATACTTATGTTTTTTAGGAATACTAAGAAGACAAAGGGAGAAGTATTCCTTCAAGATCCTATAGGAGTAGATAAGGAGGGTAATGAAATTTGTCTCATAGATATTTTAAGTAGTGACTCTGATTCGGTATTAGAGGCTGTTGAAAATTCATTACAGGTTAAGGAACTTTATAAAAAAATGTCTGATGTCTTAAGTCCTAGGGAGAAAGAAATAATTCAAATGAGATATGGTCTTTTAGATGGTGATATAAAAACACAGAGGGAAATAGCGGGAATTCTTGGTATATCAAGATCATATGTATCTAGAATAGAAAAAAAGGCATTAAAAAAATTAAATAAGGAATTTAAATGTTAA
PROTEIN sequence
Length: 234
MFMLQYLLELVGSKIFLTGYVTGNSTFPKPLNEKEEKIYLERLKDGDVEAKRVLVERNLRLVAHIVKKYSSNYQNSKEMDDLISIGTIGLIKAIDSFDTNKGIRLATYAAKCIDNEILMFFRNTKKTKGEVFLQDPIGVDKEGNEICLIDILSSDSDSVLEAVENSLQVKELYKKMSDVLSPREKEIIQMRYGLLDGDIKTQREIAGILGISRSYVSRIEKKALKKLNKEFKC*