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NECEvent2014_4_4_scaffold_159_14

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 18837..19169

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein homolog n=3 Tax=Clostridium perfringens RepID=Q8XMI4_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 222
  • Evalue 1.70e-55
30S ribosomal protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 221
  • Evalue 1.10e-55
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT16416.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 221
  • Evalue 5.40e-55

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 333
TTGGAACTTAATAAAGAGATTATAAAAGGACATGTGGAAAGTATAATATTATCACTTTTACAAGAAAAAGATTTATATGGGTATGAGATTTCAAAATTAATTAGAGAAAACAGTAAAGAAGCCTTTGAGGTCAAGGATGGAACCTTATATGTTGTTTTAAAAAGGTTAGAAAAATTAGGACTTGTAATATCATACTGGGGTGATTGTAAAAGTGGTGGTGGAAGAAGAAAATATTTTAAAATTACAGAGGATGGAGTTAATTATCTAAAAGAAAAAAAGAGTGAATGGGAATTTCTAAAGAGTATTATGAATATTTTTTTGGGGGGAGAATAG
PROTEIN sequence
Length: 111
LELNKEIIKGHVESIILSLLQEKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVISYWGDCKSGGGRRKYFKITEDGVNYLKEKKSEWEFLKSIMNIFLGGE*