ggKbase home page

NECEvent2014_4_4_scaffold_170_22

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 18593..19081

Top 3 Functional Annotations

Value Algorithm Source
PTS system, IIB component n=5 Tax=Clostridium perfringens RepID=H7CZZ0_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 162.0
  • Bit_score: 324
  • Evalue 8.20e-86
  • rbh
PTS system transporter subunit IIB similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 162.0
  • Bit_score: 324
  • Evalue 2.30e-86
PTS system, IIB component {ECO:0000313|EMBL:EIA15765.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 162.0
  • Bit_score: 324
  • Evalue 1.10e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
ATGCCAATAGTACATTTCAGAGTTGACGGAAGACTTATTCATGGACAAGTAGCCTTGGCTTGGTCTAAGATGACAAATCCAAATCATATCATAGTTGCCAATGATATGGTTGCTAGTGATCCAAATCAACAAGCAATACTAAAATTAGCTGCTCCAAAGCAAGTAAGAATATCAATGCAGCCAGTTGATAAGGTTATTGCATACTTAAATAGAGGACTAGCTCCAAATGAGAGAGTTTTTCTATTAGTTAAGGATGTGGTAGATGCTAATAGGATTTATGAGGGTGGATTCAAATATATTGACCTTAATATAGGCAATATGACTCATAAACCAAATGCTAAAAAATTAAGTGAAAAACTATTTGTTACAGAAAAAGAGTTTGAAGCATTAAAAAGTTTGCTAGATAAAAATGTTAATTGCTACTTCCAAATGATTCCGACAGACTCAAAGCAAGATATTAGACCGTTAGTAGAGGCTTTTAAAAGTTAA
PROTEIN sequence
Length: 163
MPIVHFRVDGRLIHGQVALAWSKMTNPNHIIVANDMVASDPNQQAILKLAAPKQVRISMQPVDKVIAYLNRGLAPNERVFLLVKDVVDANRIYEGGFKYIDLNIGNMTHKPNAKKLSEKLFVTEKEFEALKSLLDKNVNCYFQMIPTDSKQDIRPLVEAFKS*