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NECEvent2014_4_4_scaffold_179_27

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 26298..27197

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSC3_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 299.0
  • Bit_score: 602
  • Evalue 2.90e-169
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 299.0
  • Bit_score: 599
  • Evalue 6.80e-169
GGDEF domain protein {ECO:0000313|EMBL:EDT71549.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 299.0
  • Bit_score: 599
  • Evalue 2.60e-168

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 900
TTGGAAGTTTTACTAGATGTAAAAGAAAGAATGTCTATATTAAAGAACTTTTATGATGAAGTTAGAGTGGTAGATCCTATAAATAATATAGTATTTTCAGATGACTTTAACCTAAAAATCAATAATAAATTTAATGAAAAAGATTGTTCCCTAAGCAATTGTTATGATGTGTGGGGAAAAAAATCAATATGCAGTACTTGCATATCAAAAAAAGCTTATTTAAAAAATGATACTTTTATAAAGTTAGAATATAATAAAAATCATGTGTTTTTAGTTATAGCTTCCCCAATTGAATTTAATGAAAATAAATATGTTGTTGAAATATTAAAAGATATAACTAATAATGGCAGTATAGTAGATGGTAGTGGAGAAGGTAATTATTTAGACTTAACAATGAAAAAGATGGGAGAAAATCTTATTAAGGATTATTTAACTGGAGTCTATAATAAAAGGTATATAGATCAGAGATTTTCAAAGGAAGCTCATAGAAACTTAAAAGAATCTATACCTACAACTGTAATTATGGCTGATATAGATTCCTTTAAAAAAGTAAATGATACCTATGGTCATTTAGTAGGTGACAAAATTTTAAGGGATTTTGCAAAGACATTAAATAATAATATCAGAGAAAATAGTGATTGGATTGGTAGATATGGAGGAGAAGAATTCATAATTGTTTTAAATAACACCAATTTAAAAAATGGAGTGAAGGTTGCTGAGAAGCTTAGAAAAATCATAGAAAAAATGAGCTTTGACTATGGTGATTTAAGTTTGAAAATAACTTCTAGCTTCGGAGTTTGTGAAGTTTCAGAAAAAGAAGATCCTTTTGATACCATAAAAAATGCTGATGAAAAATTATATATGGCAAAAATGACAGGAAGAAATAAAACTGTATTTTAG
PROTEIN sequence
Length: 300
LEVLLDVKERMSILKNFYDEVRVVDPINNIVFSDDFNLKINNKFNEKDCSLSNCYDVWGKKSICSTCISKKAYLKNDTFIKLEYNKNHVFLVIASPIEFNENKYVVEILKDITNNGSIVDGSGEGNYLDLTMKKMGENLIKDYLTGVYNKRYIDQRFSKEAHRNLKESIPTTVIMADIDSFKKVNDTYGHLVGDKILRDFAKTLNNNIRENSDWIGRYGGEEFIIVLNNTNLKNGVKVAEKLRKIIEKMSFDYGDLSLKITSSFGVCEVSEKEDPFDTIKNADEKLYMAKMTGRNKTVF*