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NECEvent2014_4_4_scaffold_230_8

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(10753..11229)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=11 Tax=Clostridium perfringens RepID=GREA_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 308
  • Evalue 3.50e-81
  • rbh
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 308
  • Evalue 9.70e-82
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=883064 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 308
  • Evalue 4.80e-81

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 477
ATGAGCGAAAAGAAACATATAATGACATATGAAGGTGTTAAAAAATTAGAAGATGAATTAGAATATCTTAAAACAGTAAAAAGAAAAGAAATAACTGAAAAGATAAAAGTTGCTTTAGGATACGGAGATTTAAGTGAGAACTCAGAATATGATGAAGCTAAAAATGAGCAAGCTTTCACTGAAGGAAGAATAATTCAATTAGAAAACATGCTTAAAAACGCTGTTGTTGTTGATGAGTCAGAAATATCAACAGATATAGTTACAGTTGGATCAATCGTTAAGGTTATGGACTTTGATTTTGATGAAGAAGTTGAGTATTCAATAGTTGGTTCAGCAGAAGCAGATCCAATGAACTTTAAGATATCAAATGAATCACCAGTTGGTGAAGGGTTAATGGGTAAAAAAGTTGGAGATGTTGTAGAGATAGAAGTACCAGGAGGAACTACTAAGTTCGAAGTTCTTGGAATAAGAAGATAG
PROTEIN sequence
Length: 159
MSEKKHIMTYEGVKKLEDELEYLKTVKRKEITEKIKVALGYGDLSENSEYDEAKNEQAFTEGRIIQLENMLKNAVVVDESEISTDIVTVGSIVKVMDFDFDEEVEYSIVGSAEADPMNFKISNESPVGEGLMGKKVGDVVEIEVPGGTTKFEVLGIRR*