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NECEvent2014_4_4_scaffold_2674_1

Organism: NECEvent2014_4_4_Propionibacterium_avidum_HGH0353-rel_64_5_partial

partial RP 32 / 55 MC: 4 BSCG 24 / 51 ASCG 5 / 38
Location: comp(3..1619)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease MsbA n=1 Tax=Propionibacterium avidum 44067 RepID=M9VKL1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 539.0
  • Bit_score: 1035
  • Evalue 0.0
  • rbh
Lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 539.0
  • Bit_score: 1035
  • Evalue 0.0
ATP-binding cassette, subfamily B, bacterial {ECO:0000313|EMBL:EPH00988.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 539.0
  • Bit_score: 1035
  • Evalue 0.0

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
AAGGCTCCCGCCCGCAACGAGCATGCCGAACTCGCCCGAGCCTCGTCACGACGAGGCGGCGGCCGGGTCGCCGAGAAGCCCATCTCCTTCGGCCCGTCCCTCAGGCGGCTGCTCGGCCAGCTCAAGCCTCATCGCCTCGTCCTGACCATTGTCGTCATCATGGCTGTGATCTCGGTGAGCTTCAATGTCATTGGCCCCAAGATCCTGGGCCGGGCCACCGACGTCATCTTCGGCGGCATTGTCGGAAAACAGCTGGGCAGACACGTCCCGCAAGCGCGTGGCATGACAGCCGGCGAATTCATCGACAAGCTCGGCCAGGCCGGTCAGAGTGGCGATCGCGGGAAGATCATCACCCTGCTGCAGCAGTACCCCGATGTCATCATCGGTTCCGGCATCGATTTCCACCGGCTCGGCGTCATCATGGCCTGGGCCCTGGGCCTGTACGCCTGCGCCGCCCTGCTGATGTTCCTGCAGGGATTCCTGCTCAACACCGCGATCCAACGATCCATGTACGACCTGCGTCGTCAGGTCAGTGCCAAGCTGGAGAGACTGCCGCTGTCCTACTTCGACGGTCAGCCCCACGGCGAGCTCATGAGCCGGATGACCAACGACATCGACAACGTCTCGCAGACCTTGCTGCAGACCCTCCAACAACTCCTCAACGCCTTGCTGACCGTCATCGGCGTGTTGATCATGATGTTCTGGATCTCCCCGTTGCTGGCGGTGATCTCCCTGGTCATCATCCCGGTTGCCGGAGTCATCGCGGGAGCCATCGGCAAGAAGGCGCAGGGGCAGTTCGCCCAGATGTGGAAGGCCACCGGAGAACTCAACTCCCACGTGGAAGAGGCGTATTCGGGCCACGCTCTGGTCAAGACCTTAGGCCGCACCCAGGCCGTTGCCCAGGAATTCCACGAACGCAACGAGGAGCTTCGTCGAGCCACCGCCAAGGCCCAATTCATCTCCGGACTCATCCAGCCGGCGATGTTCCTGCTCGGCAACGCCAACTACGCCGTCATCGTGCTCATCGGCTGTCTGCGGGTGGCCAACGGCCAGATGCCACTGGGCAATGTGCAGGCCTTCATTCAATACTCCCGAATGTTCACCCAGCCGATCACCCAGATCGCCTCCATGGCGAATCTGTTGCAGTCAGGAGTGGCCTCGGCAGAGCGCGTCTTCCAGGTCCTCGATGCCGACGAAATGTCCACAGACGCCGACAGCAGTCTCCCTGCCACCAAGGGACGTGTCGTCTTCGACCACGTGAGCTTCTCCTACAGCCCCGACAAACCTCTCATCGCCGACCTCTCGTTGGTCGCCGAGCCGGGCCAGACGGTGGCGATAGTCGGGCCCACCGGTGCTGGCAAGACGACGCTGGTCAACCTGCTAATGCGGTTCTACGAGATCGACGGCGGGGTCATCACCCTCGACGGCTTCGACATCTCCACGGTCCCCCGCACCGAACTGCGCTCTCGCCTGGGAATGGTGTTGCAGGACACCTGGCTGTTCAGCGGGACGATCCACGACAACATTGCCTACGGCCGCCCGGAGGCGTCCGAGGAGGAGATCCTCGACGCCGCCCGGGCCGCTCACGTCGACCACTTCGTCAACACCCTGCCTGAC
PROTEIN sequence
Length: 539
KAPARNEHAELARASSRRGGGRVAEKPISFGPSLRRLLGQLKPHRLVLTIVVIMAVISVSFNVIGPKILGRATDVIFGGIVGKQLGRHVPQARGMTAGEFIDKLGQAGQSGDRGKIITLLQQYPDVIIGSGIDFHRLGVIMAWALGLYACAALLMFLQGFLLNTAIQRSMYDLRRQVSAKLERLPLSYFDGQPHGELMSRMTNDIDNVSQTLLQTLQQLLNALLTVIGVLIMMFWISPLLAVISLVIIPVAGVIAGAIGKKAQGQFAQMWKATGELNSHVEEAYSGHALVKTLGRTQAVAQEFHERNEELRRATAKAQFISGLIQPAMFLLGNANYAVIVLIGCLRVANGQMPLGNVQAFIQYSRMFTQPITQIASMANLLQSGVASAERVFQVLDADEMSTDADSSLPATKGRVVFDHVSFSYSPDKPLIADLSLVAEPGQTVAIVGPTGAGKTTLVNLLMRFYEIDGGVITLDGFDISTVPRTELRSRLGMVLQDTWLFSGTIHDNIAYGRPEASEEEILDAARAAHVDHFVNTLPD