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NECEvent2014_4_4_scaffold_3940_1

Organism: NECEvent2014_4_4_Propionibacterium_avidum_HGH0353-rel_64_5_partial

partial RP 32 / 55 MC: 4 BSCG 24 / 51 ASCG 5 / 38
Location: comp(3..1031)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203633 species="Bacteria; A similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 343.0
  • Bit_score: 680
  • Evalue 1.30e-192
Transcription-repair-coupling factor n=1 Tax=Propionibacterium avidum 44067 RepID=M9VF31_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 343.0
  • Bit_score: 680
  • Evalue 7.20e-193
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 343.0
  • Bit_score: 681
  • Evalue 9.20e-194

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Taxonomy

Propionibacterium sp. KPL2005 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
GTGCTGGAGCACCCGGTTCGTATCGATTTCTTCGGTGACGAGATCGAGGAGATGACCTCCTTCGCGGTGGCCGATCAGCGATCCACCGACGAAACCCACCGGGAGCTCATCTGCGCTCCGTGTCGTGAGCTCACCCTCACCGACGAGGTCCGTTCCAGGGCCAGGACCCTGTTACCGGACCACCCCGAACTGGCGGACATGCTGGAACGGATCGCCGATGGTCAGGCCGTCGAAGGGATGGAAGCCCTCATGCCAGCCCTGGTCGACGAGATGGAGCTGCTCGTCGACGTCCTTCCCGAGCACGCCATGGTCATCCTCTCGGACCCCGAGATGGTGCGCTCCCGGGCAGCAGACCTGGTCCGCACCTCCGAAGAATTCCTGGGAGCCGGGTGGGCGGCTGCCGCCGGTGGTGGTCAGGCCCCGATCGACCTGGCGGCCTCGGGATACCGCAGCCTGGCCCATGTGAGGGCCCACTGCCTCGAGCGCGGCATGGCGTGGTGGTCGATGTCCTCCTTCGCCCTGGACGCCCCTGCCACGGATGCCCTTGCCGACGACGACGTCACGACCGCCCCACGCACCGTCAACCCGCATCTGGAGGCCGTCGAGCCGTGGCGCGGAGACGTGGAGGCGGCCGTCAAGGATCTCACCACCAGACTCGGTGAGGGCTGGACGGTCGTGCTGTGCGCCGAGGGTGAGGGCATCGCCAAGCGCATGGCGGAGCTGCTCGGTGAACATCACGTCGCGGCCAAGCTGGTCGACGAGGTCGACGCCGACATCACCGAGCCAAGCGTCCAGGTCGTCCGGCTGCATCAGCGTCATGGTTTCGCCGCGGATTCCCTCAAACTGCTCGTGGCCTCCACCGGAGACCTCGCTGACTCCCAGGACCCAGCCGTCAGTGGCGAGCGGCGCATGCCCCGACGCCGTCGCAATCAGATCCAGCCGCTTGAGCTCAAGTCCGGCGACCTCGTCGTCCATGAGCAGCACGGTGTGGGCCGATACGTGGAGATGGTGCAGCGCACCGTGGGTGGG
PROTEIN sequence
Length: 343
VLEHPVRIDFFGDEIEEMTSFAVADQRSTDETHRELICAPCRELTLTDEVRSRARTLLPDHPELADMLERIADGQAVEGMEALMPALVDEMELLVDVLPEHAMVILSDPEMVRSRAADLVRTSEEFLGAGWAAAAGGGQAPIDLAASGYRSLAHVRAHCLERGMAWWSMSSFALDAPATDALADDDVTTAPRTVNPHLEAVEPWRGDVEAAVKDLTTRLGEGWTVVLCAEGEGIAKRMAELLGEHHVAAKLVDEVDADITEPSVQVVRLHQRHGFAADSLKLLVASTGDLADSQDPAVSGERRMPRRRRNQIQPLELKSGDLVVHEQHGVGRYVEMVQRTVGG