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NECEvent2014_4_4_scaffold_3237_1

Organism: NECEvent2014_4_4_Propionibacterium_avidum_HGH0353-rel_64_5_partial

partial RP 32 / 55 MC: 4 BSCG 24 / 51 ASCG 5 / 38
Location: 1..729

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase HrpB n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3X6F4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 242.0
  • Bit_score: 479
  • Evalue 1.70e-132
ATP-dependent helicase HrpB {ECO:0000313|EMBL:EPH00958.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 242.0
  • Bit_score: 479
  • Evalue 2.40e-132
ATP-dependent RNA helicase HrpB similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 242.0
  • Bit_score: 476
  • Evalue 4.10e-132

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GCGATGCTCGCGACCGAGACCACGGTCACCTGGAATGGCGGCAAGGCTCGCGGTCGACGCGTTTCGCGGCTTGGTGCCATCGAGTTGTCGTCCACCCCGGTCCGGCCAGGGCGTGATGAGGTTCGTCGAGCGGTGTTGGAAGAAGTGAGATCCCGCGGGCTCGAGGTTATAGGCCTGACGAAGAACGGTGAGTCCCTGAGGAGTCGGCTCGCCCTGGCCCACCGGGTACTCGGAGACCCCTGGCCTGACGTCAGTGATGAGGCTCTGCTCTCTCGCGCCGAGGAATGGCTCGACTTGGATGGCCTGGCCGCAGGGCAGGGGAGTGACGCCACCTCTGGCCTACGCAGGATGCTGGGGTGGCAGGAATCGGCACGTCTTGACGAGGCCCTCCCCGAGACGATCACGGTCCCCAGCGGGTCGCGAATCCGCGTTGACTACCCGGAACCCGGCAGTGACGCCGCTCCGGTGCTCGCGGTGAAGCTCCAGGAGTGTTTCGGGTGGACCGACGGCCCGATGATCTGTGACGGCCGCGTGAAGGTGGTGCTCCATCTGTTGTCCCCAGCCCGACGTCCGTTGGCCGTCACCGACGATCTCGCCAGTTTCTGGGCCAACGTCTACCCCTCGGTGCGAGCGGAGAATCGTGGACGTTATTCCAAACATTCCTGGCCCGAGGACCCACTGACAGCCATGCCCACGAAGCGCACGAATCGGGCGTTGGGGCATAGCTGA
PROTEIN sequence
Length: 243
AMLATETTVTWNGGKARGRRVSRLGAIELSSTPVRPGRDEVRRAVLEEVRSRGLEVIGLTKNGESLRSRLALAHRVLGDPWPDVSDEALLSRAEEWLDLDGLAAGQGSDATSGLRRMLGWQESARLDEALPETITVPSGSRIRVDYPEPGSDAAPVLAVKLQECFGWTDGPMICDGRVKVVLHLLSPARRPLAVTDDLASFWANVYPSVRAENRGRYSKHSWPEDPLTAMPTKRTNRALGHS*