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NECEvent2014_4_4_scaffold_3598_2

Organism: NECEvent2014_4_4_Propionibacterium_avidum_HGH0353-rel_64_5_partial

partial RP 32 / 55 MC: 4 BSCG 24 / 51 ASCG 5 / 38
Location: comp(607..1152)

Top 3 Functional Annotations

Value Algorithm Source
ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 3.60e-96
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 181.0
  • Bit_score: 352
  • Evalue 3.30e-94
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Propionibacterium avidum 44067 RepID=M9VIZ2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 181.0
  • Bit_score: 356
  • Evalue 1.30e-95
  • rbh

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Taxonomy

Propionibacterium sp. KPL1852 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TCCGATCCGACCGCGCTGGTGGCGAACCTGCCCTACAACGTCGCTGTCCCGGTGCTGCTGCACATGCTGGCGATCTGTCCGCAGTGGTCGACGGGTGTCGTCATGGTGCAGTCGGAGGTGGCCGACCGTCTGGTGGCCGCTCCCGGATCCAAGATCTACGGGGTTCCCAGCGCCAAGCTGGCCTGGTATGCCGAGGCGACCCGGGTGGGAAATGTCCCCCCGACGGTCTTCTGGCCGGTGCCCAACGTGGATTCCGGGTTGGTCCGGATCACGAGGAGACGTCCTCCTCAGATCGACGGACGAGCCCCTGAGACCACTCGCTCCCAGGTCTTCCGCGTGATTGACGCGGCCTTCGCGTCCCGTCGCAAGATGCTGAGATCCGCACTGGCTGGACTGTGTGGTGGTTCGGCGGCTGCCTCCGACCTCATCGGCGCTGTCGGGATCGACCCGACGGTGCGCGGAGAGGTCCTTGACATCGTGGACTTGACCCGTGTTGCGGAGGCGTTGGCCCAGGCCGGCGTCCTCGGCGATCCGGGTCAGGTGTGA
PROTEIN sequence
Length: 182
SDPTALVANLPYNVAVPVLLHMLAICPQWSTGVVMVQSEVADRLVAAPGSKIYGVPSAKLAWYAEATRVGNVPPTVFWPVPNVDSGLVRITRRRPPQIDGRAPETTRSQVFRVIDAAFASRRKMLRSALAGLCGGSAAASDLIGAVGIDPTVRGEVLDIVDLTRVAEALAQAGVLGDPGQV*