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NECEvent2014_4_4_scaffold_3629_1

Organism: NECEvent2014_4_4_Propionibacterium_avidum_HGH0353-rel_64_5_partial

partial RP 32 / 55 MC: 4 BSCG 24 / 51 ASCG 5 / 38
Location: comp(3..518)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator CelR n=2 Tax=Propionibacterium avidum RepID=G4CWT6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 334
  • Evalue 4.90e-89
  • rbh
HTH-type transcriptional regulator CelR {ECO:0000313|EMBL:EGY78074.1}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionib similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 334
  • Evalue 6.90e-89
transcriptional regulator, LacI family protein similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 332
  • Evalue 6.90e-89

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Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAGCGAGGACACAGGTCGGCCCACCATGCATGACGTGGCTCGGGTGGCCGGCGTATCCCATGCGACGGTGTCACGAGTTCTCAACGGTCACACCAATGTGGCCCCCGCAACTGCTCGTGCCGTGGCTGACGCGATCATCACCACCGGTTACGTACCCAATCGGGCAGCAAGGTCACTACGGGTTCAGTCAACTGACACCGTGGTCCTCGTCGCCCGCGAGAACGTCAATGTCTTCTACACCGAGCCGACCCTGTCCCCGATGGCATCCGGCGCGAACCTTCGTTTGTCGGAGCACGGCTACCAGATGCTGCTTGCCCTCGTCGATGATCCCCGCTCAGCAGAACGTGTGGGGTCATTGATTGCCGGAGGATCCTTCGACGCGGCGATTCTGGTCGCCATGACCAACGAGGATCCGCTCGTTGCACGCCTCATGGCGACAAATATCCCGCTCGTGACGGCATCAACGCCATTCCCCGGATCCGACATCCCCTCCGCTGACACGGACAACGTCGGA
PROTEIN sequence
Length: 172
MSEDTGRPTMHDVARVAGVSHATVSRVLNGHTNVAPATARAVADAIITTGYVPNRAARSLRVQSTDTVVLVARENVNVFYTEPTLSPMASGANLRLSEHGYQMLLALVDDPRSAERVGSLIAGGSFDAAILVAMTNEDPLVARLMATNIPLVTASTPFPGSDIPSADTDNVG