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NECEvent2014_4_4_scaffold_42

Alias: 174_004_scaffold_42

Search features with annotation key words

Displaying items 31-60 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_42_31
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29256..30173)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis 2_1_59BFAA RepID=K1JWG3_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB30988.1}; TaxID=742823 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthen
hypothetical protein
NECEvent2014_4_4_scaffold_42_32
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30340..30774
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D21D
Uncharacterized protein {ECO:0000313|EMBL:CEN53102.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canim
hypothetical protein
NECEvent2014_4_4_scaffold_42_33
Sutterella parvirubra, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30983..31951
DNA (969bp) protein (323aa)
Site-specific recombinase, phage integrase family n=1 Tax=Sutterella parvirubra YIT 11816 RepID=H3KDZ3_9BURK rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHY31668.1}; TaxID=762967 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" sour
int2; integrase/recombinase
NECEvent2014_4_4_scaffold_42_34
unknown

Not on your lists

comp(32643..34187)
DNA (1545bp) protein (515aa)

This feature has no annotations

NECEvent2014_4_4_scaffold_42_35
unknown

Not on your lists

34318..34467
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_4_4_scaffold_42_36
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34622..35764)
DNA (1143bp) protein (381aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellac
Isoaspartyl dipeptidase n=1 Tax=Sutterella sp. CAG:397 RepID=R7BUZ1_9BURK rbh
isoaspartyl dipeptidase
NECEvent2014_4_4_scaffold_42_37
Sutterella sp. CAG:397, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35784..37160)
DNA (1377bp) protein (459aa)
Transporter anaerobic C4-dicarboxylate uptake C family n=1 Tax=Sutterella sp. CAG:397 RepID=R7BUS5_9BURK rbh
Transporter anaerobic C4-dicarboxylate uptake C family {ECO:0000313|EMBL:CDD69609.1}; TaxID=1262976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella;
hypothetical protein
NECEvent2014_4_4_scaffold_42_38
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37565..39412
DNA (1848bp) protein (616aa)
histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis HGA0223 RepID=S3C4D2_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EPE01123.1}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthe
NECEvent2014_4_4_scaffold_42_39
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39461..40099
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Sutterella RepID=R5Q1Q8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EPE01124.1}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthe
LuxR response regulator receiver
NECEvent2014_4_4_scaffold_42_40
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40222..41727
DNA (1506bp) protein (502aa)
Succinate dehydrogenase/fumarate reductase flavoprotein subunit n=2 Tax=Sutterella RepID=R5Q4X9_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EPE01125.1}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthe
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein rbh
NECEvent2014_4_4_scaffold_42_41
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41872..43284)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Shewanella benthica KT99 RepID=A9DFR6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAF62998.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
hypothetical protein
NECEvent2014_4_4_scaffold_42_42
Acinetobacter bereziniae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43368..44936
DNA (1569bp) protein (523aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1217650 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00035E2F70 rbh
C-5 cytosine-specific DNA methylase
NECEvent2014_4_4_scaffold_42_43
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45010..45330)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WVP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63378.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihomini
HhH-GPD family protein
NECEvent2014_4_4_scaffold_42_44
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

comp(45290..46666)
DNA (1377bp) protein (459aa)
Helicase C-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZD73_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:CDA34549.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
hypothetical protein
NECEvent2014_4_4_scaffold_42_45
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46653..47354)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37928.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
DNA or RNA helicases of superfamily II
NECEvent2014_4_4_scaffold_42_46
unknown

Not on your lists

comp(47393..47587)
DNA (195bp) protein (65aa)

This feature has no annotations

NECEvent2014_4_4_scaffold_42_47
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47713..48243)
DNA (531bp) protein (177aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=2 Tax=Bacteroides finegoldii RepID=K5BUX8_9BACE
cysteine methyltransferase
Cysteine methyltransferase {ECO:0000313|EMBL:AII63816.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
NECEvent2014_4_4_scaffold_42_48
unknown

Not on your lists

48598..48705
DNA (108bp) protein (36aa)

This feature has no annotations

NECEvent2014_4_4_scaffold_42_49
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49009..50232
DNA (1224bp) protein (408aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
DNA-methyltransferase (dcm) (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEH7_9FIRM rbh
NECEvent2014_4_4_scaffold_42_50
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50232..51044
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEH6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL18659.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
Restriction endonuclease , Eco47II
NECEvent2014_4_4_scaffold_42_51
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51061..52032
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VTZ0_PAETH rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS50636.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein rbh
NECEvent2014_4_4_scaffold_42_52
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

52038..52592
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum subsp. nucleatum ATCC 23726 RepID=D5RFK0_FUSNC
putative membrane protein
Strain B4065 NODE_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIO66379.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylo
NECEvent2014_4_4_scaffold_42_53
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(53020..53460)
DNA (441bp) protein (147aa)
DNA-binding helix-turn-helix protein n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2RZK7_9BACL
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK56032.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella b
transcriptional regulator
NECEvent2014_4_4_scaffold_42_54
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53744..53938
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2D0_HISS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI24701.1}; TaxID=205914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Histophilus.;" source="Haemophilus somnus (
NECEvent2014_4_4_scaffold_42_55
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

53941..55065
DNA (1125bp) protein (375aa)
Phage integrase n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2C9_HISS1 rbh
Contig000022, whole genome shotgun sequence {ECO:0000313|EMBL:KIS07840.1}; TaxID=1381085 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococc
phage integrase
NECEvent2014_4_4_scaffold_42_56
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55055..55417
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2C8_HISS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI24703.1}; TaxID=205914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Histophilus.;" source="Haemophilus somnus (
NECEvent2014_4_4_scaffold_42_57
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

55525..56031
DNA (507bp) protein (169aa)
Possible phage DNA-polymerase or DNA-primase n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2C7_HISS1 rbh
Contig000022, whole genome shotgun sequence {ECO:0000313|EMBL:KIS07842.1}; TaxID=1381085 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococc
phage DNA-polymerase or DNA-primase
NECEvent2014_4_4_scaffold_42_58
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56105..56425
DNA (321bp) protein (107aa)
Possible phage DNA-polymerase or DNA-primase n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2C7_HISS1
phage DNA-polymerase or DNA-primase
Possible phage DNA-polymerase or DNA-primase {ECO:0000313|EMBL:ABI24704.1}; TaxID=205914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Histophilus.;" source=
NECEvent2014_4_4_scaffold_42_59
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56385..57815
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2C6_HISS1 rbh
virE; virulence-associated protein E
Uncharacterized protein {ECO:0000313|EMBL:ABI24705.1}; TaxID=205914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Histophilus.;" source="Haemophilus somnus (
NECEvent2014_4_4_scaffold_42_60
Histophilus somni, Histophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58117..58458
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Histophilus somni (strain 129Pt) RepID=Q0I2C5_HISS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI24706.1}; TaxID=205914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Histophilus.;" source="Haemophilus somnus (
Displaying items 31-60 of 84 in total

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