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NECEvent2014_4_4_scaffold_95_6

Organism: NECEvent2014_4_4_Sutterella_wadsworthensis-rel_49_12

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6526..10002)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=742823 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 999.99
  • Bit_score: 1685
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Sutterella wadsworthensis 2_1_59BFAA RepID=K1JXB8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 999.99
  • Bit_score: 1685
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 999.99
  • Bit_score: 1266
  • Evalue 0.0

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Taxonomy

Sutterella wadsworthensis → Sutterella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3477
ATGTCGACATCTACTCCTTCTCTCGTTAAAGACGATATCCGCAAAGTGCGGGCGGGCGAACACCGCGTGTTGACGCTCCCCCCTCTTGCTCCCGATGCGCTTGCGCTTGCTCGTATGGCCGAGGAGCTTCACGAGCACCAAGAAAAGTTGCTCGTCGTTTGTGCGGACTCGATTGATGTGGTGCGATTGAGCCAAGAAATTCCTTGGTTTGACCCGACGCTCAATGTCGTGACGTTCCCTGACTGGGAAACGCTCCCCTATGACGTGCTCTCCCCACAAGAGAGCATTATCTCTGAGCGCTTAGAGACGCTCTACCGCTTGACGCAATCTAAGAGCAGCGTGGATGTGGTGCTTGTTTCCGCTGTCACGGTGGCGCAGCGCTTAGCGCCTGTTTCCTTTGTGGGTGGCGCCACATTCTTCTTCTCAGTAGGAGACAAGCTCGATATTGAGGGGCTTCGTCAGAGCTTGGTAATGGCTGGCTACTCTGCCGTTCAGCAAGTGCTCGCAGCAGGGGAATTTGCTGTGCGTGGAAGCTTGATTGACGTCTTCCCCATGGGGTCGTCTCATCCTTTCCGTTTGGACCTTTTTGACGATGAAATCGATTCCATTCGCTGGTTTGATATTGAAACGCAACGCTCAATGGAAGAGGTGGATCGCATTCGCCTTCTCCCTGAGCACGAATTCCCAGTAAACGAAACGGAGCTCTCTGACTTTCGTCAGCGCTGGCGCACGCGATTTACGGGTGATCCAGCCAAGAGTTTGATTTACCGAGATATTGGAAAAGGTGTTCTTCCTCCTGGGATTGAATACTATTTCCCGCTCTTTTTTGATGAAACAGCAACCTTTGCAGACTATCTCCCCGAGAGCACCAAAGTCGTGACCTTTGGGGACATTCAGGCAACGCTTTCTGCCTTTATGCGTGATACCACCTCACGCGCAGCAATGCTCGCGGGTGACGTTGCGCGCCCGCCAATGTCACCAGACGAACTCTGGCTCAATGCAGAAGCATTTTTCTTGAGTTTAGAGAAGTTTGCCCGCTTCTCCTTTAAGACACCCGATGCTAAAGCCGTTGCGCGCCAAACACATCTCAAAACGGTCACTGTTGATCGTAAGAGTCAAAACCCGCTCGTTAACCTCTTGGCCTTTACGGACGCAGAAAAAACGCGTCACCATCGCATTTTGATTTGCGCGAGCAGTATTGGTCGACAGACCACAATGAGTGAACTCTTTCGCTCGAACGGCTTAAAGTATGCCGAAGTGAATTCTTGGGGGGACTTTTTAACGAGTGATAGTCCTGTTGGACTCACGGTGAGCCCTCTTTTTGCTGCCGCGGAACTCGCAGACCCTGGTATCACGATTCTCACAGAAAGTGAACTCTATGCAGCTTCTCCGCGTCGCTCTCGTGTACGTCGCTCAGCCTATGCGGCGAGCAACGTCGAGATGCTCGTGCGTGACGTCTCAGAACTCAAAGTAGGCGACCCTGTGGTGCACTTAGAACATGGGATTGGGCGCTATCAGGGGCTCGAATATAAAGAGATGCCTGATGGTCCAGCAGAATTTTTGCGTATCGACTACAAAAACGATGCTCGTTTATTTGTCCCGATTGCCAACCTTCACCTCATCTCTCGCTATTCAGGGAGCGATGTGGAAAATGCGCCCTTGCACACCTTGGGACGCGGTGACTGGGAAAAGGCACGTAAAAAAGCCAGCGAACAGGCACGCGATACCGCAGCTGAACTCCTGCATCTTTACGCCATGCGACAGTCTCGAGAAGGATTCAAATTTAAGATTGATCCAGCCGAGTACGATGCGTTTCGCGAAGGGTTTGCCTTTGAAGAAACGCCCGATCAGCTCAACGCGATTAATGCCGTTGTCGATGATATGACAAGCGGCAAATCGATGGACCGCTTGATCTGCGGTGACGTGGGCTTTGGGAAAACGGAAGTTGCCTTGCGTGCTGCCTTTGTGGCTGTCACCTCCGGGAAGCAAGTCGCTGTACTTTGCCCCACGACGCTTTTGGCTGAACAACACGCTCAGACCTTTAAAGATCGCTTCTCTGCTTGGCCGGTTACGGTTTCTGAGTTGAGCCGTTTCCGCACTGGGCGCGAAACGACGAAAACACTTGAAGGCTTAGAGCGTGGCACAGTTGACGTGGTGATTGGCACGCATAAACTTCTCACCGATAAGGTAAAGTTTGCAAACCTGGGGCTCGTCATTATTGATGAAGAGCACCGCTTTGGCGTACGTCAAAAAGAAATGCTTAAAAAATTGCGTGCTGAAGTAGACGTACTCACGCTCACCGCTACGCCAATTCCTCGTACGCTTTCGATGAGCCTCGAAGGGATTCGCGATTTTTCTGTGATTGCCACACCGCCAGAGCGTCGCCTCTCGGTGAAAACCTTTGTGCAGGCGGAAAATAACGGCATTATTCGTGAAGCCGTTATTCGTGAATTAAAGCGTGGCGGTCAGGTCTACTTCCTTCATAACGAAGTCGATACGATCAATAATCGCCGTGAACAGCTGGAAAAGTTGCTCCCCGAAGCGCGTATTGCGATTGCTCACGGGCAAATGGGCGAGCGTGAGTTGGAGCATGTGATGCGTGACTTCTACCAGCAACGCTTTAATTTGCTTCTTTGCTCAACCATTATTGAAACAGGGATTGACGTTCCCACTGCGAACACGATCATCATTGCGCGAGCAGACAAACTGGGGCTTGCACAGTTGCACCAATTACGTGGTCGTGTGGGACGAAGCCACCATCAGGCCTACGCTTACCTGCTCACGCCACCCACCGGTGCGATGACCAAGCAAGCGGAAAAGCGACTCGAAGCGATTCAGTCCCTAGAAGAATTAGGCAGTGGTTTTTACCTTGCAATGCACGACTTGGAAATTCGTGGTGCAGGGGAAGTGTTGGGCGAACATCAGTCGGGCGAAATTATGGAAGTGGGGTTCGATCTCTACAACCGTATGCTCACTTCAGCCGTGAAAGCACTGCGACGCGGAGAAACACCTGACTTTGAAAGTCCCCTTGCCGCGACAACGGAAATCAACCTTCATGCGCCAGCTCTTTTGCCAAGCACCTATGTGCCAGACGTGGCTCAGCGCCTAGGTTTTTATAAAGAACTCTCAAGCGCGGATTCGCTTGAGGCGATTTATCAGGCCACCGAAGCGCTCGCTGACCGCTATGGTAAGTTGCCAAGCGCAGCCGAGCGTTTAATTGCTACGCATAAACTGCGTATTAAGTGTGAGGCGATTGGGATTCGTAAGATTGATAGTGCGGAAACCGCGACCGTAATCACCTTTACCCCAAAGGCGAATATCGAGCCGCTCACGCTCATCAAGTTCTTACAGTCAAGAAAAGACGCACGTATGTTGGCGCCAGATCGTATGAAACTCTCGACTGGTGGTGCGACACCAGAGGCACGCATTGCGCTTCTCTACGACATCATTGCCGCGCTCTCTAAAGCACCAGACTAA
PROTEIN sequence
Length: 1159
MSTSTPSLVKDDIRKVRAGEHRVLTLPPLAPDALALARMAEELHEHQEKLLVVCADSIDVVRLSQEIPWFDPTLNVVTFPDWETLPYDVLSPQESIISERLETLYRLTQSKSSVDVVLVSAVTVAQRLAPVSFVGGATFFFSVGDKLDIEGLRQSLVMAGYSAVQQVLAAGEFAVRGSLIDVFPMGSSHPFRLDLFDDEIDSIRWFDIETQRSMEEVDRIRLLPEHEFPVNETELSDFRQRWRTRFTGDPAKSLIYRDIGKGVLPPGIEYYFPLFFDETATFADYLPESTKVVTFGDIQATLSAFMRDTTSRAAMLAGDVARPPMSPDELWLNAEAFFLSLEKFARFSFKTPDAKAVARQTHLKTVTVDRKSQNPLVNLLAFTDAEKTRHHRILICASSIGRQTTMSELFRSNGLKYAEVNSWGDFLTSDSPVGLTVSPLFAAAELADPGITILTESELYAASPRRSRVRRSAYAASNVEMLVRDVSELKVGDPVVHLEHGIGRYQGLEYKEMPDGPAEFLRIDYKNDARLFVPIANLHLISRYSGSDVENAPLHTLGRGDWEKARKKASEQARDTAAELLHLYAMRQSREGFKFKIDPAEYDAFREGFAFEETPDQLNAINAVVDDMTSGKSMDRLICGDVGFGKTEVALRAAFVAVTSGKQVAVLCPTTLLAEQHAQTFKDRFSAWPVTVSELSRFRTGRETTKTLEGLERGTVDVVIGTHKLLTDKVKFANLGLVIIDEEHRFGVRQKEMLKKLRAEVDVLTLTATPIPRTLSMSLEGIRDFSVIATPPERRLSVKTFVQAENNGIIREAVIRELKRGGQVYFLHNEVDTINNRREQLEKLLPEARIAIAHGQMGERELEHVMRDFYQQRFNLLLCSTIIETGIDVPTANTIIIARADKLGLAQLHQLRGRVGRSHHQAYAYLLTPPTGAMTKQAEKRLEAIQSLEELGSGFYLAMHDLEIRGAGEVLGEHQSGEIMEVGFDLYNRMLTSAVKALRRGETPDFESPLAATTEINLHAPALLPSTYVPDVAQRLGFYKELSSADSLEAIYQATEALADRYGKLPSAAERLIATHKLRIKCEAIGIRKIDSAETATVITFTPKANIEPLTLIKFLQSRKDARMLAPDRMKLSTGGATPEARIALLYDIIAALSKAPD*