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NECEvent2014_4_5_scaffold_1828_1

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_741_partial

partial RP 31 / 55 MC: 2 BSCG 32 / 51 ASCG 11 / 38 MC: 2
Location: 1..1986

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 616.0
  • Bit_score: 1142
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQJ9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 616.0
  • Bit_score: 1142
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 616.0
  • Bit_score: 1142
  • Evalue 0.0

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Taxonomy

Veillonella sp. 6_1_27 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1986
GCAGGTATGACTGTAGCTATTGCTGATATTAAAGTACCAGAAGTTAAAACTAGCTTGTTAGATACAGCGGAACAAGAGGTAGAAAAAGTATCTCGTATGTACCGCCGTGGTCTTATTACAGAAGAAGAACGTTATCGTAAAACTATCCAATTATGGACAAAGGCAACAGAAGATGTTACCGATGCGATGATGGATAATATGGCGTGCGATAAAGACGGCTTTAACCCTGTTTACATGATGGCTATCTCTGGTGCCCGCGGTAATAAACAACAAATTCGTCAGCTTGCTGGTATGCGTGGTTTGATGGCCGATCCATCTGGTCGAATCATTGACTTGCCAATTAAAGCAAACTTTAAAGAAGGCTTGACTGTATTGGATTACTTTACATCCTCTCATGGTGCTCGTAAAGGTTTGGCCGATACAGCGCTTCGTACAGCTGACTCTGGTTACTTGACACGTCGTCTCGTTGACGTATCTCAAGACGTAATCGTTCGTGAGGACGATTGTGACGTTGTAGGTATCGATCTCGTTCGTGAACGTGCTCGCTTGGCTACATCCCCACGTCAAGCATTAGAATTGCTTAAAGATAAACTTATTGGTCGCGTTTTAGATAAAGATGTTGTGAATGCTGAAACAGGGGAACTTGTTGTACCAGCTGAAACTATCTTGGATGAACAATGCTTGGCAGATATTGCTGAAGCCGGTGTTACATCTATCGCATTGCGCGGTGCACATTTGGGCTCTGATAGCGATATTAACCATACTAACTTGGTTCAAAAAATTATTCTTGGTGAAAGCGACGATAGCATCCGTGCAACATTGAAAGAAACTATGGTTCAAAATATGTTGAACAAGGATACTGTACAAGCAATCGTTGACAGCGAAGGGGTAGAAATCTTCCCAGCTGATACACGTCTTACTGAAGAAGGCATCGAAGCTATCCTTAACTCCGATGTAAAAGAAGTACAAGTGCGGAACAATGAAATTCATGGTATTGAAGTGGAAGCTATCGTTGAAGGCACTGGTGTTATCGAGCCATTAAAAGACCGTATCGTAGGTCGTATTGCAGCTGAAGAATTAGTTAACAAAGAAACTGGCGAAGTCATCGTTCCTCTTAATGGTGAAATCACAGAGGCGTTAGCTGATGAAGTTGTAAAACATTATGAAACAGTAAAAATCCGTTCTGTATTGACTTGCCGTAGCCCATATGGCGTATGTCGCAAGTGTTATGGTCGTGATCTAGGAACTGGCAACCAAGTTCAAGTTGGTGAAGCGGTAGGTATTATTGCAGCACAATCCATCGGTGAACCGGGTACTCAGTTGACAATGCGTACATTCCATACTGGGGGTGTCGCAGGTGACGATATTACACAAGGTTTGCCACGTGTCGAAGAATTGTTCGAAGCTCGTAAACCAAAACGTAATGCTATCATCGCTGAAAATGAAGGTACAGTTCGCGTTGTACCTAATGAAGGTAAGAAAGGTACGAACACTATCTTTATCACTGGTGAAGATGGTATTGAACTTGATTACCTCATTCCTTACGGTTCGCGCATTATCGTTAAAGACGGTGACGTGGTATCCTTGGGCGCTCGTTTGACAGAAGGTTCTATCAATCCTCATGACATCATGCGCGTCATGGGTACTGAAGCAACTCAACGTTATCTCGTATACGAAGTACAAAAAGTATACAAATCCCAAGGTGTAGAAATTAACGATAAACATATCGAAGTTATCGTTCGTCAAATGCTTCATAAAGTTAAAGACTCCTTCTTGTCCGCTGCGTCCTTCCAAGAAACAACACGTGTTCTTACCGACGCTGCTATCAAGGGTAAAATCGATCCATTATTGGGCTTGAAAGAAAACGTAATTATCGGTAAGTTGATTCCTGCTGGTACAGGCATGAGTCGTTACCGTAAGATTGAAGTTGTAAAAAATACACCTGAAATCATTGATATTACGGAAGAGGTTATGTCTGAAGATTAA
PROTEIN sequence
Length: 662
AGMTVAIADIKVPEVKTSLLDTAEQEVEKVSRMYRRGLITEEERYRKTIQLWTKATEDVTDAMMDNMACDKDGFNPVYMMAISGARGNKQQIRQLAGMRGLMADPSGRIIDLPIKANFKEGLTVLDYFTSSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCDVVGIDLVRERARLATSPRQALELLKDKLIGRVLDKDVVNAETGELVVPAETILDEQCLADIAEAGVTSIALRGAHLGSDSDINHTNLVQKIILGESDDSIRATLKETMVQNMLNKDTVQAIVDSEGVEIFPADTRLTEEGIEAILNSDVKEVQVRNNEIHGIEVEAIVEGTGVIEPLKDRIVGRIAAEELVNKETGEVIVPLNGEITEALADEVVKHYETVKIRSVLTCRSPYGVCRKCYGRDLGTGNQVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELFEARKPKRNAIIAENEGTVRVVPNEGKKGTNTIFITGEDGIELDYLIPYGSRIIVKDGDVVSLGARLTEGSINPHDIMRVMGTEATQRYLVYEVQKVYKSQGVEINDKHIEVIVRQMLHKVKDSFLSAASFQETTRVLTDAAIKGKIDPLLGLKENVIIGKLIPAGTGMSRYRKIEVVKNTPEIIDITEEVMSED*