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NECEvent2014_4_5_scaffold_127_14

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(15359..16330)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W679_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 318.0
  • Bit_score: 394
  • Evalue 7.50e-107
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ENO18030.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 318.0
  • Bit_score: 396
  • Evalue 4.70e-107
periplasmic binding protein and sugar binding domain of the LacI family protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 321.0
  • Bit_score: 236
  • Evalue 9.60e-60

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 972
GTGGCGCGCCATGCCGGCGTGTCAGCCAACACGGTCTCGCGCGTGGTACGAGGCGACCCTGAAGTCGCAGATTCCACACGAGCGAAAATCACCGCGCTGCTCCACGAGATGGGGTACCGGCCGAACTATGCGGCCAGGGCTCTTGCCGGCAAGCGCACAGGTGTCATCCATGTGCTGATGGCGGCGCCGATGTTCCACGGGCACGGCCAGACGTTGCTGCATGTGCTCAACGCTGCCAGCGATGCCGGTCTGAGCGTGTCGATTTCGAGTGTCTACACGTCCAACGGACACGTCACCAGTGACGCGATCCCATTTCGAGTCGACGGAATCGTCATTCTGGGCGGTCAGGACCCCGTCATCGAAATGGCGATGAAGCTGGCTCGCACAACGCCGACGACGCTGCTGCTGTCATCGGAAACGAATATCGATGGCGTATCGACCGTCTCTGTCGATAACGTGCTGGGCTCACGAGTAGCCACCGACCACTTGTTGCGTGGAGGAGTCACTGACATCGTTCACCTGATGGGGCCGACAGGCTGGAACGACGCACATCAGCGGCGCAAGGGATTCGAAGAAGCGTGTGCGCAGTCCGACGCCTCTTTAAATGTCGAGATCATCGAATGTGGCTCGTGGAATGCTGTGGACGGATTCGATGCCACCTACAGCATGGGGCGCATCCCTCAGGGAATCGTCGCATCCAACGACCAGATCGCGCTGGGCGCCATGCGCGCCGTTCGCGAGCTCGGCGGAGAGCTCCCCCACGACACCCGCGTGGTCGGTTTTGACGATGAGACGGGCGCGCAGTGCTTCTCGCCGCCGCTCACAACTATTCGACAGCCCTTTGACCGGGTGGGCCGCACGGCGATTCGTCAGATCGTCGACCTCATTGCCGGACGCCCACCGCAGGACTTCATCATTCCCCCCGAACTGGTCATTCGGACCAGCTCCCAAATTGTCACTCACTACGAATGA
PROTEIN sequence
Length: 324
VARHAGVSANTVSRVVRGDPEVADSTRAKITALLHEMGYRPNYAARALAGKRTGVIHVLMAAPMFHGHGQTLLHVLNAASDAGLSVSISSVYTSNGHVTSDAIPFRVDGIVILGGQDPVIEMAMKLARTTPTTLLLSSETNIDGVSTVSVDNVLGSRVATDHLLRGGVTDIVHLMGPTGWNDAHQRRKGFEEACAQSDASLNVEIIECGSWNAVDGFDATYSMGRIPQGIVASNDQIALGAMRAVRELGGELPHDTRVVGFDDETGAQCFSPPLTTIRQPFDRVGRTAIRQIVDLIAGRPPQDFIIPPELVIRTSSQIVTHYE*