ggKbase home page

NECEvent2014_4_5_scaffold_182_10

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 11656..12684

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KR03_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 337.0
  • Bit_score: 419
  • Evalue 3.00e-114
  • rbh
HTH-type transcriptional regulator {ECO:0000313|EMBL:EFU61561.1}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 337.0
  • Bit_score: 419
  • Evalue 4.20e-114
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 348.0
  • Bit_score: 329
  • Evalue 1.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinomyces sp. oral taxon 180 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGCCGAAGCACCGCACACGGATGACTGATATCGCTGAACACGCGCAGGTGTCAACAGCTACCGTGTCACGCGTCATTAACGGAACTGGCCCCGTGTCAGCCGAGACGCGCCACCGCGTCCTGACGGCGATTGATTCTCTGGGGTATGAACGCCCCCTTCCTGAACGCTCCTCCTCCACCCCCTGCATCGGGATCATCATCCCCGAACTGACCAATCCAATTTTCGCCGCATACGCCCACGCCATCCAGGCTGAGGTTTCGCGCACAGGTGCAATCCCATTGATCTGCAGTCAGACTCCCGGCTCCACCTCCGAGGGTGACTACGTTCAAACCCTTCTGTCCCACGGATGCTCCGGCTTGATTTTTGTGTCGGGGCGTCACGCCGATTTTCGCGGAGATATGTCCCGCTACCATCACCTGCGCGAACGACGCATCCCATTCGTCACCATCAATGGATCACGCGAGGAGATTGAAAGCGCAGATTTTTCTGCCGCCGACCAGATCGGTATCTCGATCGCCGTGCGTCACCTGCGCGAACTGGGACACACACGGATCGCTCTGCTGTCCGGGCATACGCACATCGTGCCCGCCAGCAGAAAAGTCGACGCATTCAAGACAGTCATGGCTCAGGAGTTCGGAATCGACAAGCCGCGCATTGTCGAAACGTTCTACACATACGAGGCCGCCGCAGCTGCAACTCACGGTCTGCTCGATGAAGGCATGACTGCCCTCGTCACTGGATCAGATATGCAGGCACTGGGCGCAATTCGCGCGGCAAAGTCACGTGGCATGCGCGTGCCGGATGACCTGTCGGTTGTCGGGTTTGACGATTCGCAACTCATGGCTCACCTCGATCCACCCCTCACGACGATCCGCCAGCCTGTCGATGCAATTACCACGGCTGCAGTTCGCACTCTGTTCGAAGCGATTAAGAATCCTGACATGCCCGCCACGTCCGGGGCATTCCTGTACACACCGGATCTGGTTGTCCGCGGTTCGACTGGCCGAGCGCCGTCCACATCGCGATAA
PROTEIN sequence
Length: 343
MPKHRTRMTDIAEHAQVSTATVSRVINGTGPVSAETRHRVLTAIDSLGYERPLPERSSSTPCIGIIIPELTNPIFAAYAHAIQAEVSRTGAIPLICSQTPGSTSEGDYVQTLLSHGCSGLIFVSGRHADFRGDMSRYHHLRERRIPFVTINGSREEIESADFSAADQIGISIAVRHLRELGHTRIALLSGHTHIVPASRKVDAFKTVMAQEFGIDKPRIVETFYTYEAAAAATHGLLDEGMTALVTGSDMQALGAIRAAKSRGMRVPDDLSVVGFDDSQLMAHLDPPLTTIRQPVDAITTAAVRTLFEAIKNPDMPATSGAFLYTPDLVVRGSTGRAPSTSR*