ggKbase home page

NECEvent2014_4_5_scaffold_182_18

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(17506..19428)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 585.0
  • Bit_score: 950
  • Evalue 9.80e-274
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 571.0
  • Bit_score: 825
  • Evalue 9.60e-237
2-isopropylmalate synthase n=1 Tax=Atopobium sp. ICM58 RepID=J3J737_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 585.0
  • Bit_score: 950
  • Evalue 7.00e-274
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1923
ATGCGCACAACAGCCAACGTTCCCACACCTCAAGCCAGCCCCATGCCGGTTGACAAGTACATTCCATTCCTGGAATCCAACCCCATCGACCTGCCCACGCGCACATGGCCCACCAAGCGCATGACACGCGCTCCGCGCTGGCTGTCCACCGACCTGCGTGACGGCAACCAGGCACTGATCGAGCCGATGGATCCCACGCGCAAGCGTGCCATGTTCGATTTGCTGGTCTCACTGGGGTACAAGGAAATCGAGATTGGATTCCCAGCGGCATCGCAAACCGACTACGACTTTGTTCGCTCTCTGATTGACGATGAGGCGATCCCTGAAGACGTGACAGTGTCTGTGCTGACACAATCACGCACCGAACTCATTGAGCGCACCATCGACGCCCTCGTCGGCATTCCCCGGGCAACGGTTCACCTGTACAACGCAACGTCGCCACTGTTCCGCGAGCTCGTCTTCCGTATGGACAAGGCACAAACCGTTGACCTGGCACAAAGCGGCACCCGGGAAATCATGGCGCGGGCAGAAAAAGTCCTCTCAGATGACACGATCTTCGGCTTCGAATACTCACCGGAAATCTTCGTGGACACGGAGCTGGACTTCGCAGCCGAAATCTGCGAAGCAGTCATGGATATCTGGCAGCCTGACGACGACCGTGAAATTGTGCTGAATCTGCCGGCAACGGTGGAGCGCGCAACGCCTAACGTGTTTGCCGACCAGATCGAATGGATGTCAACGAACCTGTCGAGGCGTGGCCACATCGCACTGTCCGTCCATCCGCATAATGACCGCGGAACGGGTGTTGCAGCAGCGGAACTGGCGTTGCTGGCCGGCGCTGACCGCGTAGAGGGATGCCTGCTTGGACAGGGGGAACGAACCGGCAACGTCGACCTGGTCAACCTCGGCCTGAACATGATGAGCCAGGGTATCGATCCGGGTATTGACTTTTCCGACGTGGATCGCATCCGGCACACGGTGGAACACTGCACCATGATGGAAACCCCGCCGCGTATGCCCTACGTGGGGGACCTGGTTTACACGTCCTTCTCCGGATCGCACCAGGACGCCATCAAGAAGGGCTTCGAAGCCCGCAAGAAGAAAGTTGCGGAAGCTGGCGGAGATGAAAACGCTGTGCCGTGGGGCATTCCGTACCTGCCGATCGACCCGCACGACGTGGGACGCTCCTACGAGGCGATCGTGCGCGTCAACTCCCAATCCGGTAAGGGGGGCGTCGCCTACCTCATGTCGACCGCACACCACATGGAACTGCCGCGACGCCTGCAAATCGAATTCTCACGCATCGTTCAGCGTCACACAGATTCTTTTGGCGGAGAGATCAACTCCGAAAACCTGTGGAAAATCTTCACCGACGAATACCTGCCCGCCGACAGGGCAAGTGGCCTGGCCCCGTGGGGACGCTTCGAAATGGGAGACTTCCACCTGTACACGCGCGGCAAAGAGCAGGAAGTGGAACTGCGCGGTGAGATCCTGGACCAGGGACAGCCCGTTGCCATCAGCGCCGTGGGAACCGGCCCGATCGACGCTTTCGTCGCAGCTATGCACGACTTCGACCTGGATGTGCGCATCCTCGACTACTCTGAGCACGCCATGAGCCAGGGACGTGACGCCACCGCAGCCGCATATGTGGAAGCAGCGGTCGACGGCCAGATCGTCTGGGGCGTCGGCATCGATTCGTCCATCACGACAGCCACATACAAGGCCGTTATTTCCGCCATGAACCGCGCTTTGAAACGGGCAGGTACGCACGGTAGCCAAGGGAGTGCGCCGCACCACCTCGAAATTCGGTGCGCGCCTGGAACCGTTCTCACTGATCGACGTGCAGCTGCATCGTGGCCGCACATTCGACATTGTGACGCAGGTCGAAATGCTGCGCCCCTACGGCACGCAGCTGGCTTCTGA
PROTEIN sequence
Length: 641
MRTTANVPTPQASPMPVDKYIPFLESNPIDLPTRTWPTKRMTRAPRWLSTDLRDGNQALIEPMDPTRKRAMFDLLVSLGYKEIEIGFPAASQTDYDFVRSLIDDEAIPEDVTVSVLTQSRTELIERTIDALVGIPRATVHLYNATSPLFRELVFRMDKAQTVDLAQSGTREIMARAEKVLSDDTIFGFEYSPEIFVDTELDFAAEICEAVMDIWQPDDDREIVLNLPATVERATPNVFADQIEWMSTNLSRRGHIALSVHPHNDRGTGVAAAELALLAGADRVEGCLLGQGERTGNVDLVNLGLNMMSQGIDPGIDFSDVDRIRHTVEHCTMMETPPRMPYVGDLVYTSFSGSHQDAIKKGFEARKKKVAEAGGDENAVPWGIPYLPIDPHDVGRSYEAIVRVNSQSGKGGVAYLMSTAHHMELPRRLQIEFSRIVQRHTDSFGGEINSENLWKIFTDEYLPADRASGLAPWGRFEMGDFHLYTRGKEQEVELRGEILDQGQPVAISAVGTGPIDAFVAAMHDFDLDVRILDYSEHAMSQGRDATAAAYVEAAVDGQIVWGVGIDSSITTATYKAVISAMNRALKRAGTHGSQGSAPHHLEIRCAPGTVLTDRRAAASWPHIRHCDAGRNAAPLRHAAGF*