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NECEvent2014_4_5_scaffold_3106_2

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 1368..2015

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomyces timonensis RepID=UPI0002DBFFCB similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 124.0
  • Bit_score: 111
  • Evalue 1.40e-21
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:ERH25861.1}; TaxID=1321818 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces john similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 157.0
  • Bit_score: 106
  • Evalue 3.80e-20
betT; high-affinity choline transport protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 155.0
  • Bit_score: 62
  • Evalue 1.30e-07

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Taxonomy

Actinomyces johnsonii → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGGCTCGCCGCTCCTGGCGTGACCGTCTGAGCAAGACATTCGACGTTGTCACCCCTGCGCGCGCTCAGCGTGCCCTTGACAGGCGAGTGGTTCCCGCATTGCAGGCTGTGGCCGATGAGCTCCACAAGGAAGATCTGCCCGCATGGGTGGTTGTTGAGGGTCCCGAAGCACAGGATCCGGATGACGAGCGTAACTTCCTGGGCCGCGTCACGCTGACAGTTGGCGGCGAATCGGAGGCCAGGGCATCGGGCGCGCAGGAGTGGGATTCAGGTGCTCAGACCACTGCTACGGGCGAGCTACCGCAGACTGATTCCACAACTGAGCTGCACGAGCAGATCAGTGAAATGGTTGATGATGCGAAGCCTCGAACGGCCGGGAGTACTTCTGCTGACGCTGAACCGAGCATCGCGGGCCTGCTGACCGAGCATCCGTTCCGCTACACCGTGCGAGTGGTCGAGTCTCCCGTTCCGTCTGTGGGCACCGCGATGGTTGCTGAGGCGAATGACGTGACGGTGCGCCTGGAAGTGCGTCCCTCGGGCGGTGGTCAGGGGTACGACATTGTGGGATGGTCCTCTGACCAGATCGCGCACGACGTTCTGGATCATTACGAAGGGTGGTTGGACTACCTGGGCGTGTACGACGAGTAG
PROTEIN sequence
Length: 216
MARRSWRDRLSKTFDVVTPARAQRALDRRVVPALQAVADELHKEDLPAWVVVEGPEAQDPDDERNFLGRVTLTVGGESEARASGAQEWDSGAQTTATGELPQTDSTTELHEQISEMVDDAKPRTAGSTSADAEPSIAGLLTEHPFRYTVRVVESPVPSVGTAMVAEANDVTVRLEVRPSGGGQGYDIVGWSSDQIAHDVLDHYEGWLDYLGVYDE*