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NECEvent2014_4_5_Actinomyces_59_217

NECEvent2014_4_5_Actinomyces_59_195
In projects: NECEvent2014_4_5

Consensus taxonomy: Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 151-176 of 176 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_6 174_005_scaffold_6
Genus: Actinomyces (84.83%)
145 157832 bp 59.60 205.59 96.34
NECEvent2014_4_5_scaffold_757 174_005_scaffold_757
Order: Actinomycetales (54.55%)
11 10568 bp 56.43 36.08 96.63
NECEvent2014_4_5_scaffold_54 174_005_scaffold_54
Genus: Actinomyces (59.15%)
71 78761 bp 59.62 208.85 96.92
NECEvent2014_4_5_scaffold_1826 174_005_scaffold_1826
Species: Actinomyces sp. oral taxon 181 (50%)
4 3348 bp 55.82 36.34 96.95
NECEvent2014_4_5_scaffold_855 174_005_scaffold_855
Genus: Actinomyces (66.67%)
9 9224 bp 61.26 226.69 96.95
NECEvent2014_4_5_scaffold_1267 174_005_scaffold_1267
Class: Actinobacteria (75%)
4 5537 bp 61.28 208.76 97.04
NECEvent2014_4_5_scaffold_3042 174_005_scaffold_3042
Species: Mobiluncus mulieris (66.67%)
3 1589 bp 59.35 168.88 97.04
NECEvent2014_4_5_scaffold_727 174_005_scaffold_727
Genus: Actinomyces (63.64%)
11 12258 bp 56.31 197.99 97.16
NECEvent2014_4_5_scaffold_289 174_005_scaffold_289
Genus: Actinomyces (78.57%)
28 30997 bp 60.37 215.61 97.30
NECEvent2014_4_5_scaffold_436 174_005_scaffold_436
Genus: Actinomyces (57.14%)
14 17402 bp 59.59 214.60 97.45
NECEvent2014_4_5_scaffold_1648 174_005_scaffold_1648
Species: Arthrobacter sp. SPG23 (50%)
2 3868 bp 52.61 39.56 97.49
NECEvent2014_4_5_scaffold_1325 174_005_scaffold_1325
Genus: Actinomyces (60%)
5 5146 bp 62.57 225.15 97.71
NECEvent2014_4_5_scaffold_1459 174_005_scaffold_1459
Species: Actinomyces sp. oral taxon 181 (66.67%)
3 4550 bp 61.34 226.98 97.71
NECEvent2014_4_5_scaffold_4171 174_005_scaffold_4171
Species: Terrabacter sp. 28 (50%)
2 1037 bp 60.17 104.44 97.78
NECEvent2014_4_5_scaffold_765 174_005_scaffold_765
Class: Actinobacteria (87.5%)
8 10476 bp 54.73 36.86 98.05
NECEvent2014_4_5_scaffold_2189 174_005_scaffold_2189
Species: Actinomyces neuii (66.67%)
3 2592 bp 58.06 50.93 98.15
NECEvent2014_4_5_scaffold_3137 174_005_scaffold_3137
Species: Actinomyces sp. ICM47 (50%)
2 1524 bp 60.70 184.74 99.21
NECEvent2014_4_5_scaffold_2409 174_005_scaffold_2409
Species: Actinomyces neuii (100%)
1 2277 bp 61.13 235.57 99.34
NECEvent2014_4_5_scaffold_2963 174_005_scaffold_2963
Species: Atopobium sp. ICM58 (100%)
1 1659 bp 62.33 243.85 99.82
NECEvent2014_4_5_scaffold_3919 174_005_scaffold_3919
Species: Actinotignum schaalii (100%)
1 1127 bp 57.41 262.87 99.82
NECEvent2014_4_5_scaffold_3537 174_005_scaffold_3537
Species: Actinomyces sp. oral taxon 180 (100%)
1 1304 bp 59.28 39.34 99.85
NECEvent2014_4_5_scaffold_3841 174_005_scaffold_3841
Species: Microbacterium sp. TS-1 (100%)
1 1153 bp 56.37 36.69 99.91
NECEvent2014_4_5_scaffold_3145 174_005_scaffold_3145
Species: Mobiluncus mulieris (100%)
1 1519 bp 61.49 163.73 99.93
NECEvent2014_4_5_scaffold_3055 174_005_scaffold_3055
Species: Mobiluncus mulieris (100%)
1 1579 bp 59.66 38.19 99.94
NECEvent2014_4_5_scaffold_3675 174_005_scaffold_3675
Species: Mobiluncus mulieris (100%)
2 1233 bp 59.77 34.67 100.24
NECEvent2014_4_5_scaffold_3676 174_005_scaffold_3676
Species: Mycobacterium orygis (50%)
2 1233 bp 53.69 177.62 100.24
Displaying items 151-176 of 176 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.