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NECEvent2014_4_5_Actinomyces_59_217

NECEvent2014_4_5_Actinomyces_59_195
In projects: NECEvent2014_4_5

Consensus taxonomy: Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 151-176 of 176 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_765 174_005_scaffold_765
Class: Actinobacteria (87.5%)
8 10476 bp 54.73 36.86 98.05
NECEvent2014_4_5_scaffold_858 174_005_scaffold_858
Class: Actinobacteria (75%)
8 9213 bp 55.29 36.86 77.11
NECEvent2014_4_5_scaffold_3804 174_005_scaffold_3804
Species: Propionibacterium acidifaciens (50%)
2 1169 bp 60.39 36.83 88.79
NECEvent2014_4_5_scaffold_3841 174_005_scaffold_3841
Species: Microbacterium sp. TS-1 (100%)
1 1153 bp 56.37 36.69 99.91
NECEvent2014_4_5_scaffold_768 174_005_scaffold_768
Species: Bifidobacterium adolescentis (50%)
8 10386 bp 53.17 36.60 93.07
NECEvent2014_4_5_scaffold_1826 174_005_scaffold_1826
Species: Actinomyces sp. oral taxon 181 (50%)
4 3348 bp 55.82 36.34 96.95
NECEvent2014_4_5_scaffold_757 174_005_scaffold_757
Order: Actinomycetales (54.55%)
11 10568 bp 56.43 36.08 96.63
NECEvent2014_4_5_scaffold_1879 174_005_scaffold_1879
Order: Actinomycetales (50%)
4 3209 bp 55.19 35.99 82.36
NECEvent2014_4_5_scaffold_2597 174_005_scaffold_2597
Class: Actinobacteria (66.67%)
3 2013 bp 59.76 35.92 82.56
NECEvent2014_4_5_scaffold_1242 174_005_scaffold_1242
Species: Actinomyces turicensis (75%)
4 5660 bp 61.91 35.88 75.69
NECEvent2014_4_5_scaffold_2418 174_005_scaffold_2418
Species: Propionimicrobium lymphophilum (100%)
1 2267 bp 46.32 35.73 82.97
NECEvent2014_4_5_scaffold_745 174_005_scaffold_745
Order: Micrococcales (53.85%)
13 12158 bp 61.51 35.58 82.42
NECEvent2014_4_5_scaffold_3675 174_005_scaffold_3675
Species: Mobiluncus mulieris (100%)
2 1233 bp 59.77 34.67 100.24
NECEvent2014_4_5_scaffold_3647 174_005_scaffold_3647
Species: Streptomyces sp. e14 (100%)
1 1247 bp 53.25 34.52 16.36
NECEvent2014_4_5_scaffold_706 174_005_scaffold_706
Genus: Actinomyces (53.85%)
13 11211 bp 59.07 34.23 84.69
NECEvent2014_4_5_scaffold_2535 174_005_scaffold_2535
Order: Micrococcales (66.67%)
3 2100 bp 55.67 34.21 83.71
NECEvent2014_4_5_scaffold_1245 174_005_scaffold_1245
Genus: Actinomyces (50%)
6 5634 bp 55.84 34.11 85.30
NECEvent2014_4_5_scaffold_955 174_005_scaffold_955
Class: Actinobacteria (75%)
8 8098 bp 52.67 33.86 77.76
NECEvent2014_4_5_scaffold_510 174_005_scaffold_510
Order: Actinomycetales (64.29%)
14 14928 bp 56.73 33.14 85.19
NECEvent2014_4_5_scaffold_2285 174_005_scaffold_2285
Genus: Actinomyces (75%)
4 2437 bp 60.24 33.11 95.65
NECEvent2014_4_5_scaffold_2992 174_005_scaffold_2992
Species: Mobiluncus mulieris (66.67%)
3 1631 bp 58.98 32.65 94.18
NECEvent2014_4_5_scaffold_4180 174_005_scaffold_4180
Species: Propionibacterium acidipropionici (50%)
2 1033 bp 60.50 32.09 92.64
NECEvent2014_4_5_scaffold_1363 174_005_scaffold_1363
Genus: Microbacterium (66.67%)
6 4977 bp 55.82 31.25 94.51
NECEvent2014_4_5_scaffold_625 174_005_scaffold_625
Class: Actinobacteria (76.47%)
17 12518 bp 62.65 30.74 84.94
NECEvent2014_4_5_scaffold_3785 174_005_scaffold_3785
Species: Actinomyces sp. S4-C9 (50%)
2 1179 bp 58.86 30.66 92.62
NECEvent2014_4_5_scaffold_2790 174_005_scaffold_2790
Domain: Bacteria (66.67%)
3 1818 bp 54.24 27.56 84.27
Displaying items 151-176 of 176 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.