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NECEvent2014_4_5_scaffold_258_31

Organism: NECEvent2014_4_5_Clostridium_butyricum_28_20

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 15214..16161

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 615
  • Evalue 4.80e-173
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 315.0
  • Bit_score: 605
  • Evalue 7.70e-171
DNA-directed RNA polymerase subunit alpha n=4 Tax=Clostridium butyricum RepID=B1QYE2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 615
  • Evalue 3.40e-173
  • rbh

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGTTAGAAATCGAAAAGCCAATAATCGAATGTATAGAATCTAATGAAGATGGTACATATGGTAAATATGTTGTTGAGCCACTTGAAAGAGGATATGGTATTACATTAGGGAATGCCTTAAGAAGAATATTATTATCATCTCTTCCAGGAGTGGCACCAACTTCTGTTAAGATAGATGGAGTTTTACATGAGTTTTCTACTGTTCAAGGTGTTAAAGAAGATGTTACAGAATTAATTCTTAACATAAAATCTTTAGCTTTAAAAATGAATGGTGAAGGGCCAAAGGTTATTTATATTGATGCTAAAGGACCAGGAGAGGTTACTGGAGCTGATATAAAGACTGATGGTGATGTTGAAGTTGTCAATAAGGATTTACATATTGCAACTTTAGATTCTGATGGTAGACTTTACATGGAATTGACAGTTAATAATGGAAGAGGTTATGTTACTCAGAACAAAAATAAGAGTGATGATTTACCAATTTCATCAATTGCAGTTGATTCAATCTATACACCAGTAAAAAGAGTTAATTTTACTGTTGACAACACAAGAGTTGGTCAAATTACTGATTATGATAAATTAACTTTAGAAATTTGGACTAATGGAACAATCAGAATAGATGAAGCTATTAGTTTATCTGCAAAAATACTTATCGAACACTTTAAATTATTCATGTCATTAACAGATAATACTAATGATATTGAAGTAATGGTAGAAAAAGAAGAAGATAAGAAAGAAAAAGTCCTAGAAATGACTGTTGAAGAACTTGATTTATCAGTTAGATCATATAACTGTTTAAAGAGAGCAGGAATAAATACAGTTCAAGAACTTGCTACTAAATCTATGGATGATATGATGAAAGTAAGAAATCTAGGAAAGAAATCTTTAGAAGAAGTTGAAAGAAAGCTTAAAGAATTAGGTTTATGCCTAAAGTTAAGTGAAGAGTAA
PROTEIN sequence
Length: 316
MLEIEKPIIECIESNEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVAPTSVKIDGVLHEFSTVQGVKEDVTELILNIKSLALKMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEVVNKDLHIATLDSDGRLYMELTVNNGRGYVTQNKNKSDDLPISSIAVDSIYTPVKRVNFTVDNTRVGQITDYDKLTLEIWTNGTIRIDEAISLSAKILIEHFKLFMSLTDNTNDIEVMVEKEEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVERKLKELGLCLKLSEE*