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NECEvent2014_4_5_scaffold_3900_2

Organism: NECEvent2014_4_5_Eggerthella_1_3_56FAA-rel_64_5_partial

partial RP 42 / 55 MC: 2 BSCG 38 / 51 ASCG 11 / 38 MC: 2
Location: comp(779..1132)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 230
  • Evalue 1.60e-57
DNA-directed RNA polymerase subunit alpha n=4 Tax=Bacteria RepID=C8WN28_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 230
  • Evalue 1.20e-57
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 230
  • Evalue 3.30e-58

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
ACTGACGGCAGCATCACGCCCACCGAGGCCGTGTGCCGCGCGTCCAACATCATCAACCAGTACATGGGCGCGTTTTTGAGCCTGTCCGACGTTGTCGACGAGGAGGAGGGCGAAATCCCGTCCATCTTCGCGCCGGAGGGCCAGGAGTCCAACGCCGAGCTGGACAAGCAGATCGAGGATCTCGACCTGTCCGTCCGCTCGTACAACTGCCTGAAGCGTGCCGGAATCCACTCGGTGCGCCAGCTCGTTGAGTTCTCCGAAAACGACCTGCTGAACATCAGAAACTTTGGTGCGAAGTCCATTGAAGAAGTGAAGGACAAGCTCATTTCCATGGACCTCAATTTGAAGCTATAG
PROTEIN sequence
Length: 118
TDGSITPTEAVCRASNIINQYMGAFLSLSDVVDEEEGEIPSIFAPEGQESNAELDKQIEDLDLSVRSYNCLKRAGIHSVRQLVEFSENDLLNIRNFGAKSIEEVKDKLISMDLNLKL*