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NECEvent2014_4_5_Eggerthella_1_3_56FAA-rel_64_5_partial

NECEvent2014_4_5_Eggerthella_64_5
In projects: NECEvent2014_4_5

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

Small C. diff scaffs added based on ESOM

Displaying items 801-850 of 990 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_3446 174_005_scaffold_3446
Species: Eggerthella sp. HGA1 (100%)
3 1346 bp 64.34 3.34 79.79
NECEvent2014_4_5_scaffold_3746 174_005_scaffold_3746
Species: Eggerthella sp. HGA1 (100%)
1 1200 bp 62.83 6.50 79.75
NECEvent2014_4_5_scaffold_3467 174_005_scaffold_3467
Species: Eggerthella lenta (100%)
2 1336 bp 67.14 4.15 79.72
NECEvent2014_4_5_scaffold_2474 174_005_scaffold_2474
Genus: Eggerthella (60%)
5 2181 bp 63.73 5.36 79.64
NECEvent2014_4_5_scaffold_2012 174_005_scaffold_2012
Genus: Eggerthella (66.67%)
3 2889 bp 58.98 5.87 79.54
NECEvent2014_4_5_scaffold_3434 174_005_scaffold_3434
Species: Eggerthella sp. HGA1 (66.67%)
3 1354 bp 60.56 4.43 79.54
NECEvent2014_4_5_scaffold_3372 174_005_scaffold_3372
Genus: Eggerthella (66.67%)
3 1387 bp 63.37 5.41 79.38
NECEvent2014_4_5_scaffold_3003 174_005_scaffold_3003
Species: Eggerthella sp. HGA1 (100%)
3 1622 bp 64.92 3.98 79.35
NECEvent2014_4_5_scaffold_1880 174_005_scaffold_1880
Genus: Eggerthella (66.67%)
3 3207 bp 66.04 5.24 79.33
NECEvent2014_4_5_scaffold_2705 174_005_scaffold_2705
Species: Eggerthella sp. HGA1 (50%)
2 1897 bp 58.88 5.85 79.23
NECEvent2014_4_5_scaffold_1863 174_005_scaffold_1863
Species: Eggerthella lenta (100%)
2 3251 bp 63.61 5.21 79.18
NECEvent2014_4_5_scaffold_4056 174_005_scaffold_4056
Species: Eggerthella lenta (100%)
3 1073 bp 58.71 6.71 79.12
NECEvent2014_4_5_scaffold_4054 174_005_scaffold_4054
Species: Eggerthella sp. HGA1 (100%)
1 1074 bp 67.88 6.70 79.05
NECEvent2014_4_5_scaffold_1580 174_005_scaffold_1580
Species: Eggerthella sp. HGA1 (80%)
5 4068 bp 49.93 5.09 78.98
NECEvent2014_4_5_scaffold_3819 174_005_scaffold_3819
Species: Eggerthella sp. HGA1 (100%)
1 1164 bp 66.15 5.41 78.87
NECEvent2014_4_5_scaffold_2313 174_005_scaffold_2313
Species: Eggerthella sp. HGA1 (100%)
3 2389 bp 66.35 4.65 78.86
NECEvent2014_4_5_scaffold_2938 174_005_scaffold_2938
Species: Eggerthella sp. HGA1 (100%)
3 1687 bp 64.08 4.80 78.78
NECEvent2014_4_5_scaffold_1955 174_005_scaffold_1955
Species: Eggerthella sp. HGA1 (60%)
5 3005 bp 64.53 4.59 78.77
NECEvent2014_4_5_scaffold_2616 174_005_scaffold_2616
Species: Eggerthella lenta (50%)
2 1996 bp 66.43 4.21 78.76
NECEvent2014_4_5_scaffold_1871 174_005_scaffold_1871
Genus: Eggerthella (71.43%)
7 3239 bp 60.91 4.63 78.73
NECEvent2014_4_5_scaffold_1623 174_005_scaffold_1623
Genus: Eggerthella (100%)
5 3948 bp 57.32 6.42 78.72
NECEvent2014_4_5_scaffold_2625 174_005_scaffold_2625
Genus: Eggerthella (66.67%)
3 1991 bp 58.56 4.97 78.70
NECEvent2014_4_5_scaffold_1849 174_005_scaffold_1849
Phylum: Actinobacteria (80%)
5 3294 bp 57.71 4.01 78.69
NECEvent2014_4_5_scaffold_3878 174_005_scaffold_3878
Species: Eggerthella lenta (66.67%)
3 1140 bp 57.72 4.47 78.68
NECEvent2014_4_5_scaffold_4085 174_005_scaffold_4085
Species: Eggerthella lenta (50%)
2 1064 bp 63.06 5.08 78.67
NECEvent2014_4_5_scaffold_2324 174_005_scaffold_2324
Genus: Eggerthella (66.67%)
3 2377 bp 62.73 4.29 78.63
NECEvent2014_4_5_scaffold_2563 174_005_scaffold_2563
Species: Eggerthella sp. HGA1 (66.67%)
3 2061 bp 60.89 4.44 78.60
NECEvent2014_4_5_scaffold_2253 174_005_scaffold_2253
Species: Eggerthella sp. HGA1 (66.67%)
3 2482 bp 65.07 6.10 78.57
NECEvent2014_4_5_scaffold_2587 174_005_scaffold_2587
Species: Eggerthella lenta (100%)
4 2024 bp 64.28 4.45 78.56
NECEvent2014_4_5_scaffold_2331 174_005_scaffold_2331
Species: Eggerthella sp. HGA1 (100%)
2 2372 bp 65.47 4.11 78.54
NECEvent2014_4_5_scaffold_1827 174_005_scaffold_1827
Species: Eggerthella sp. HGA1 (75%)
4 3346 bp 58.52 5.38 78.45
NECEvent2014_4_5_scaffold_2120 174_005_scaffold_2120
Species: Eggerthella lenta (50%)
4 2695 bp 55.21 5.62 78.40
NECEvent2014_4_5_scaffold_3703 174_005_scaffold_3703
Species: Eggerthella lenta (100%)
3 1217 bp 62.78 4.07 78.39
NECEvent2014_4_5_scaffold_2669 174_005_scaffold_2669
Species: Eggerthella sp. HGA1 (66.67%)
3 1943 bp 63.97 3.63 78.28
NECEvent2014_4_5_scaffold_3857 174_005_scaffold_3857
Species: Eggerthella sp. HGA1 (50%)
2 1146 bp 61.61 4.71 78.27
NECEvent2014_4_5_scaffold_2710 174_005_scaffold_2710
Species: Eggerthella sp. HGA1 (75%)
4 1890 bp 62.06 4.52 78.25
NECEvent2014_4_5_scaffold_3424 174_005_scaffold_3424
Species: Eggerthella sp. HGA1 (50%)
2 1359 bp 64.39 4.08 78.15
NECEvent2014_4_5_scaffold_3597 174_005_scaffold_3597
Species: Eggerthella sp. HGA1 (50%)
2 1269 bp 61.70 4.85 78.01
NECEvent2014_4_5_scaffold_3680 174_005_scaffold_3680
Species: Eggerthella lenta (50%)
2 1231 bp 69.70 6.09 77.99
NECEvent2014_4_5_scaffold_4018 174_005_scaffold_4018
Species: Eggerthella lenta (100%)
2 1086 bp 66.30 4.97 77.90
NECEvent2014_4_5_scaffold_2736 174_005_scaffold_2736
Species: Eggerthella sp. HGA1 (100%)
3 1864 bp 61.32 4.18 77.90
NECEvent2014_4_5_scaffold_3261 174_005_scaffold_3261
Genus: Dermabacter (66.67%)
3 1453 bp 66.69 4.03 77.84
NECEvent2014_4_5_scaffold_2508 174_005_scaffold_2508
Species: Eggerthella lenta (100%)
3 2129 bp 59.04 4.51 77.64
NECEvent2014_4_5_scaffold_3756 174_005_scaffold_3756
Species: Peptoclostridium difficile (50%)
2 1195 bp 64.27 6.53 77.57
NECEvent2014_4_5_scaffold_3815 174_005_scaffold_3815
Species: Eggerthella lenta (100%)
2 1165 bp 64.46 4.64 77.51
NECEvent2014_4_5_scaffold_3721 174_005_scaffold_3721
Species: Eggerthella lenta (50%)
2 1208 bp 61.26 6.95 77.48
NECEvent2014_4_5_scaffold_3313 174_005_scaffold_3313
Species: Eggerthella lenta (50%)
2 1423 bp 57.27 4.64 77.37
NECEvent2014_4_5_scaffold_3575 174_005_scaffold_3575
Species: Peptoclostridium difficile (100%)
1 1284 bp 63.71 6.07 77.10
NECEvent2014_4_5_scaffold_3240 174_005_scaffold_3240
Species: Eggerthella lenta (66.67%)
3 1470 bp 66.12 4.49 77.07
NECEvent2014_4_5_scaffold_3442 174_005_scaffold_3442
Species: Eggerthella lenta (66.67%)
3 1350 bp 63.63 6.44 76.89
Displaying items 801-850 of 990 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.