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NECEvent2014_4_5_Eggerthella_1_3_56FAA-rel_64_5_partial

NECEvent2014_4_5_Eggerthella_64_5
In projects: NECEvent2014_4_5

Consensus taxonomy: Eggerthella  →  Eggerthellales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Description

Small C. diff scaffs added based on ESOM

Displaying items 101-150 of 990 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1925 174_005_scaffold_1925
Species: Eggerthella sp. HGA1 (100%)
3 3075 bp 65.79 4.00 90.83
NECEvent2014_4_5_scaffold_2284 174_005_scaffold_2284
Species: Eggerthella sp. HGA1 (66.67%)
3 2439 bp 67.53 4.00 90.16
NECEvent2014_4_5_scaffold_1849 174_005_scaffold_1849
Phylum: Actinobacteria (80%)
5 3294 bp 57.71 4.01 78.69
NECEvent2014_4_5_scaffold_4237 174_005_scaffold_4237
Species: Eggerthella lenta (66.67%)
3 1010 bp 69.31 4.01 99.21
NECEvent2014_4_5_scaffold_3016 174_005_scaffold_3016
Species: Eggerthella sp. HGA1 (50%)
2 1607 bp 61.11 4.01 81.21
NECEvent2014_4_5_scaffold_2568 174_005_scaffold_2568
Species: Eggerthella lenta (50%)
2 2052 bp 65.59 4.02 94.88
NECEvent2014_4_5_scaffold_3447 174_005_scaffold_3447
Species: Eggerthella sp. HGA1 (66.67%)
3 1344 bp 62.35 4.02 81.03
NECEvent2014_4_5_scaffold_3604 174_005_scaffold_3604
Species: Eggerthella sp. HGA1 (50%)
2 1265 bp 58.18 4.03 93.91
NECEvent2014_4_5_scaffold_3261 174_005_scaffold_3261
Genus: Dermabacter (66.67%)
3 1453 bp 66.69 4.03 77.84
NECEvent2014_4_5_scaffold_2266 174_005_scaffold_2266
Species: Eggerthella sp. HGA1 (50%)
4 2458 bp 65.34 4.03 85.44
NECEvent2014_4_5_scaffold_4038 174_005_scaffold_4038
Species: Eggerthella lenta (100%)
1 1079 bp 78.22 4.03 99.81
NECEvent2014_4_5_scaffold_3088 174_005_scaffold_3088
Species: Eggerthella sp. HGA1 (66.67%)
3 1557 bp 65.00 4.05 75.72
NECEvent2014_4_5_scaffold_2092 174_005_scaffold_2092
Species: Eggerthella lenta (66.67%)
3 2738 bp 70.49 4.05 93.35
NECEvent2014_4_5_scaffold_3219 174_005_scaffold_3219
Species: Eggerthella lenta (100%)
1 1482 bp 60.53 4.05 88.26
NECEvent2014_4_5_scaffold_2615 174_005_scaffold_2615
Genus: Eggerthella (80%)
5 1997 bp 64.40 4.06 91.64
NECEvent2014_4_5_scaffold_1643 174_005_scaffold_1643
Order: Eggerthellales (50%)
6 3879 bp 58.78 4.06 94.51
NECEvent2014_4_5_scaffold_3224 174_005_scaffold_3224
Species: Eggerthella lenta (100%)
1 1479 bp 71.53 4.06 81.34
NECEvent2014_4_5_scaffold_3955 174_005_scaffold_3955
Species: Eggerthella sp. HGA1 (100%)
1 1107 bp 66.40 4.07 81.30
NECEvent2014_4_5_scaffold_3702 174_005_scaffold_3702
Species: Eggerthella lenta (100%)
1 1217 bp 61.38 4.07 81.35
NECEvent2014_4_5_scaffold_3703 174_005_scaffold_3703
Species: Eggerthella lenta (100%)
3 1217 bp 62.78 4.07 78.39
NECEvent2014_4_5_scaffold_3050 174_005_scaffold_3050
Species: Eggerthella lenta (50%)
2 1582 bp 59.54 4.08 81.16
NECEvent2014_4_5_scaffold_4081 174_005_scaffold_4081
Species: Eggerthella sp. HGA1 (100%)
2 1065 bp 64.51 4.08 99.72
NECEvent2014_4_5_scaffold_2843 174_005_scaffold_2843
Species: Eggerthella sp. HGA1 (75%)
4 3018 bp 57.39 4.08 62.82
NECEvent2014_4_5_scaffold_3357 174_005_scaffold_3357
Species: Peptoclostridium difficile (100%)
2 1396 bp 65.69 4.08 89.61
NECEvent2014_4_5_scaffold_3424 174_005_scaffold_3424
Species: Eggerthella sp. HGA1 (50%)
2 1359 bp 64.39 4.08 78.15
NECEvent2014_4_5_scaffold_3117 174_005_scaffold_3117
Species: Eggerthella sp. HGA1 (50%)
2 1539 bp 64.00 4.09 99.42
NECEvent2014_4_5_scaffold_2941 174_005_scaffold_2941
Species: Eggerthella lenta (100%)
3 1685 bp 66.47 4.09 75.67
NECEvent2014_4_5_scaffold_2486 174_005_scaffold_2486
Species: Eggerthella lenta (50%)
2 2163 bp 64.03 4.09 93.34
NECEvent2014_4_5_scaffold_1502 174_005_scaffold_1502
Species: Eggerthella sp. HGA1 (50%)
4 4397 bp 62.38 4.09 74.91
NECEvent2014_4_5_scaffold_3060 174_005_scaffold_3060
Species: Eggerthella sp. HGA1 (50%)
2 1575 bp 66.73 4.10 83.43
NECEvent2014_4_5_scaffold_2826 174_005_scaffold_2826
Species: Eggerthella lenta (66.67%)
3 1792 bp 63.84 4.10 80.02
NECEvent2014_4_5_scaffold_2636 174_005_scaffold_2636
Species: Eggerthella lenta (100%)
2 1974 bp 62.77 4.10 95.59
NECEvent2014_4_5_scaffold_2417 174_005_scaffold_2417
Species: Eggerthella sp. HGA1 (66.67%)
3 2267 bp 64.84 4.10 95.02
NECEvent2014_4_5_scaffold_3986 174_005_scaffold_3986
Species: Eggerthella lenta (100%)
3 1098 bp 58.65 4.10 98.91
NECEvent2014_4_5_scaffold_2331 174_005_scaffold_2331
Species: Eggerthella sp. HGA1 (100%)
2 2372 bp 65.47 4.11 78.54
NECEvent2014_4_5_scaffold_3997 174_005_scaffold_3997
Species: Slackia heliotrinireducens (100%)
1 1094 bp 57.68 4.11 99.82
NECEvent2014_4_5_scaffold_3075 174_005_scaffold_3075
Species: Eggerthella lenta (66.67%)
3 1565 bp 70.73 4.12 97.19
NECEvent2014_4_5_scaffold_2363 174_005_scaffold_2363
Species: Peptoclostridium difficile (66.67%)
3 2332 bp 64.37 4.12 82.98
NECEvent2014_4_5_scaffold_3128 174_005_scaffold_3128
Species: Peptoclostridium difficile (100%)
2 1529 bp 67.43 4.12 99.08
NECEvent2014_4_5_scaffold_2199 174_005_scaffold_2199
Species: Eggerthella sp. HGA1 (50%)
2 2581 bp 62.96 4.13 92.52
NECEvent2014_4_5_scaffold_3748 174_005_scaffold_3748
Species: Eggerthella lenta (100%)
2 1199 bp 62.89 4.13 67.31
NECEvent2014_4_5_scaffold_1757 174_005_scaffold_1757
Species: Eggerthella sp. HGA1 (75%)
4 3520 bp 64.32 4.13 96.05
NECEvent2014_4_5_scaffold_3081 174_005_scaffold_3081
Genus: Eggerthella (66.67%)
3 1559 bp 62.92 4.14 76.20
NECEvent2014_4_5_scaffold_2658 174_005_scaffold_2658
Species: Eggerthella sp. HGA1 (66.67%)
3 1955 bp 64.45 4.14 90.69
NECEvent2014_4_5_scaffold_1943 174_005_scaffold_1943
Species: Eggerthella sp. HGA1 (75%)
4 3040 bp 61.81 4.14 87.63
NECEvent2014_4_5_scaffold_4016 174_005_scaffold_4016
Species: Eggerthella sp. HGA1 (100%)
2 1087 bp 64.03 4.14 99.08
NECEvent2014_4_5_scaffold_3029 174_005_scaffold_3029
Species: Eggerthella lenta (50%)
2 1596 bp 70.43 4.14 87.59
NECEvent2014_4_5_scaffold_3030 174_005_scaffold_3030
Species: Eggerthella lenta (66.67%)
3 1596 bp 66.48 4.14 92.67
NECEvent2014_4_5_scaffold_3089 174_005_scaffold_3089
Species: Eggerthella sp. HGA1 (50%)
2 1556 bp 64.91 4.15 94.67
NECEvent2014_4_5_scaffold_3928 174_005_scaffold_3928
Species: Peptoclostridium difficile (100%)
1 1121 bp 69.22 4.15 51.65
Displaying items 101-150 of 990 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.