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NECEvent2014_4_5_scaffold_163

Alias: 174_005_scaffold_163

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_163_1
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(263..1369)
DNA (1107bp) protein (369aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=866776 species="Bacteria
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5A8_9FIRM rbh
hypothetical protein
NECEvent2014_4_5_scaffold_163_2
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1396..2136)
DNA (741bp) protein (247aa)
PF04816 family protein n=1 Tax=Veillonella sp. ACP1 RepID=J4QF71_9FIRM rbh
PF04816 family protein {ECO:0000313|EMBL:EJO50439.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
NECEvent2014_4_5_scaffold_163_trna_1
unknown

Not on your lists

comp(2289..2360)
DNA (72bp)
transferRNA
NECEvent2014_4_5_scaffold_163_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2445..3008)
DNA (564bp) protein (188aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LC20_9FIRM rbh
GTP cyclohydrolase I
NECEvent2014_4_5_scaffold_163_4
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3010..3660)
DNA (651bp) protein (217aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Veillonella atypica KON RepID=L1PVU9_9FIRM rbh
radical SAM family protein
NECEvent2014_4_5_scaffold_163_5
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3647..3985)
DNA (339bp) protein (113aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; V
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Veillonella atypica KON RepID=L1PWT5_9FIRM
6-pyruvoyl-tetrahydropterin synthase
NECEvent2014_4_5_scaffold_163_6
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4129..5292)
DNA (1164bp) protein (388aa)
RNA polymerase sigma factor SigA n=2 Tax=Veillonella RepID=J5AR64_9FIRM rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
RpoD subfamily RNA polymerase sigma-70 subunit
NECEvent2014_4_5_scaffold_163_7
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5314..7071)
DNA (1758bp) protein (586aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1203593 species="Bacteria; Firmicutes;
DNA primase n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZSE1_9FIRM rbh
DNA primase
NECEvent2014_4_5_scaffold_163_8
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7245..8750)
DNA (1506bp) protein (502aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=936588 species="Bacteria; Firmicutes; Negativic
Ribonuclease Y n=1 Tax=Veillonella sp. ACP1 RepID=J5AKA5_9FIRM rbh
RNA binding metal dependent phosphohydrolase
NECEvent2014_4_5_scaffold_163_9
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8919..9371)
DNA (453bp) protein (151aa)
Regulatory protein RecX n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5B6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" so
regulatory protein RecX
NECEvent2014_4_5_scaffold_163_10
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9430..10473)
DNA (1044bp) protein (348aa)
Protein RecA n=5 Tax=Veillonella RepID=E1L5B7_9FIRM rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=936591 species="Bacteria; Firmicute
recA protein
NECEvent2014_4_5_scaffold_163_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10473..11723)
DNA (1251bp) protein (417aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5B8_9FIRM rbh
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veil
competence/damage-inducible protein CinA
NECEvent2014_4_5_scaffold_163_12
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11784..13130)
DNA (1347bp) protein (449aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella sp. ACP1 RepID=J4QF92_9FIRM rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
MiaB-like tRNA modifying enzyme YliG
NECEvent2014_4_5_scaffold_163_13
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13247..14287)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3ATV6_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD79709.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
extracellular solute-binding protein
NECEvent2014_4_5_scaffold_163_14
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14284..16185)
DNA (1902bp) protein (634aa)
UPF0313 protein HMPREF9684_0496 n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LC09_9FIRM rbh
UPF0313 protein HMPREF0870_01058 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella aty
radical SAM protein
NECEvent2014_4_5_scaffold_163_15
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16220..16672)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=E1L5C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD79711.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
XRE family transcriptional regulator
NECEvent2014_4_5_scaffold_163_16
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16686..19376)
DNA (2691bp) protein (897aa)
FtsK/SpoIIIE family protein n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LC07_9FIRM rbh
Putative stage III sporulation protein E {ECO:0000313|EMBL:EUB27351.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella
cell division protein FtsK
NECEvent2014_4_5_scaffold_163_17
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19454..20773)
DNA (1320bp) protein (440aa)
ATPase, AAA family n=1 Tax=Veillonella atypica KON RepID=L1PWK9_9FIRM rbh
ATPase, AAA family {ECO:0000313|EMBL:EKY19805.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
ATPase AAA
NECEvent2014_4_5_scaffold_163_18
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(21061..22875)
DNA (1815bp) protein (605aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EJO50443.1}; EC=6.1.1.- {ECO:0000313|EMBL:EJO50443.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonell
Aspartate--tRNA ligase n=2 Tax=Veillonella RepID=E1LC05_9FIRM rbh
aspartyl-tRNA synthetase
NECEvent2014_4_5_scaffold_163_19
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(22872..24143)
DNA (1272bp) protein (424aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=4 Tax=Veillonella RepID=E1L5C6_9FIRM rbh
histidyl-tRNA synthetase
NECEvent2014_4_5_scaffold_163_20
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24143..25570)
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EJO50465.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EJO50465.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonell
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Veillonella sp. ACP1 RepID=J5AKA9_9FIRM rbh
radical SAM protein
NECEvent2014_4_5_scaffold_163_21
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25563..26051)
DNA (489bp) protein (163aa)
Transcriptional regulator, Fur family n=3 Tax=Veillonella RepID=E1LC02_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD79717.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Fur family ferric uptake regulator
NECEvent2014_4_5_scaffold_163_22
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26082..26717)
DNA (636bp) protein (212aa)
Metallo-beta-lactamase domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5C9_9FIRM rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFL56481.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella aty
beta-lactamase
NECEvent2014_4_5_scaffold_163_23
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26717..28957)
DNA (2241bp) protein (747aa)
GTP diphosphokinase {ECO:0000313|EMBL:EJO50446.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EJO50446.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;
GTP diphosphokinase n=1 Tax=Veillonella sp. ACP1 RepID=J4JGC3_9FIRM rbh
(p)ppGpp synthetase I SpoT/RelA
NECEvent2014_4_5_scaffold_163_24
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28954..30951)
DNA (1998bp) protein (666aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EUB27314.1}; EC=3.1.-.- {ECO:0000313|EMBL:EUB27314.1};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZZZ6_9FIRM rbh
single-stranded-DNA-specific exonuclease RecJ
NECEvent2014_4_5_scaffold_163_25
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31237..32655)
DNA (1419bp) protein (473aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBU3_9FIRM
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EFR60761.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Ve
biotin and thiamin synthesis associated protein
NECEvent2014_4_5_scaffold_163_26
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32893..33219)
DNA (327bp) protein (109aa)
Putative iron compound ABC transporter, iron compound-binding protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KNQ1_9FIRM
hypothetical protein
Putative iron compound ABC transporter, iron compound-binding protein {ECO:0000313|EMBL:EFG25728.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillo
NECEvent2014_4_5_scaffold_163_27
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33596..34360)
DNA (765bp) protein (255aa)
UPI0003D6497D related cluster n=1 Tax=unknown RepID=UPI0003D6497D rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ETJ13946.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DO
membrane protein
NECEvent2014_4_5_scaffold_163_28
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34357..35013)
DNA (657bp) protein (219aa)
ABC transporter, ATP-binding protein n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2S4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGL76440.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parv
YbbL ABC transporter ATP-binding protein
NECEvent2014_4_5_scaffold_163_29
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(35154..35243)
DNA (90bp) protein (30aa)
50S ribosomal protein L27 n=2 Tax=Veillonella RepID=K9DPZ4_9FIRM
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS
Displaying 30 items

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