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NECEvent2014_4_5_scaffold_2953_3

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_17_partial

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 2 ASCG 6 / 38 MC: 1
Location: 1102..1668

Top 3 Functional Annotations

Value Algorithm Source
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:EGL77502.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EGL77502.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellac similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 189.0
  • Bit_score: 352
  • Evalue 2.70e-94
Ribose ABC transport system, periplasmic ribose-binding protein RbsB n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UCQ0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 189.0
  • Bit_score: 352
  • Evalue 1.90e-94
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 190.0
  • Bit_score: 347
  • Evalue 2.30e-93

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAAAAAACTATTGTTACTATTGGCGATGGCCGTTATGGTTATCGGTCTTGTAGCAGGCTGTGGTAAAAGCGCTGATAACGGCGGCGACAAAAAATCCGGCACTATCGGCTTCTCTGTTTCCACATTGAACAACCCATTCTTCGTATCTATGAAAGAAGGCGTTGAGGCTCAAGCTAAAGCGCTTGGTCTTAAAGTTAAAATCGTTGATGCTCAAAACGATCCTGCAAAACAAGCAAACGATATTTCTGACTTGCTTGAAAGCGGCGTATCCGTATTGATCATTAACCCTGTAGACTCTGCAGCTATCTCTACTTCTGTAGAAGCAGCAAATGCTAAAAACATTCCTGTAATCACTGTTGACCGCTCTGCTGACAAAGGCAAAGTAGTAGCTCACATCGCTTCCGATAACGTAAAAGGCGGCGAAATGGCAGCTCAACTTATCGCTGATAAAGTAGGCAAAGCTGCGAAAGTAGCTGAAATCGAAGGTATCCCTGGTGCTTCCGCAACTCGTGAACGCGGCCAAGGTTTCCATAACGTAGCTGACAAAGACTTAACAGTAGTAGCA
PROTEIN sequence
Length: 189
MKKLLLLLAMAVMVIGLVAGCGKSADNGGDKKSGTIGFSVSTLNNPFFVSMKEGVEAQAKALGLKVKIVDAQNDPAKQANDISDLLESGVSVLIINPVDSAAISTSVEAANAKNIPVITVDRSADKGKVVAHIASDNVKGGEMAAQLIADKVGKAAKVAEIEGIPGASATRERGQGFHNVADKDLTVVA