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NECEvent2014_4_5_scaffold_3790_1

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_17_partial

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 2 ASCG 6 / 38 MC: 1
Location: comp(1..660)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Jag n=1 Tax=Veillonella parvula HSIVP1 RepID=T0U3V1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 420
  • Evalue 1.10e-114
  • rbh
RNA-binding protein Jag {ECO:0000313|EMBL:EQC64569.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 220.0
  • Bit_score: 420
  • Evalue 1.60e-114
single-stranded nucleic acid binding R3H domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 220.0
  • Bit_score: 418
  • Evalue 1.60e-114

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 660
ATGGAATTTATCGATGTATCTGCTAAAACCATTGAAGATGCCATTGCTAAAGGTGTAGCTCAATTGGCCTCTGAAGGCCAAGAATTGGTAGAAACTAAGGTCTTAGAACAACCTTCTAGTGGATTTTTAGGCATTGGTCGTAAACCAGCAGTTGTTCGCTTATTCTTCACTGCTTTAGCTAAATCTGCTACTGCAGAAGAAGCAGCTAATGTTAAAGAACAATCTGTAGCTATTGCTTCCGAACCAGTGGCAACAAGCGAAACAGAAGTACAAGATACGGCAGCTGAAACTTCTGAAAGTACTGTAGAAGAAAAACCTTCTAAAAAGGAACTTTCAAAAGAGGATCAACAAGAAATTGCTGAAAAAGGTAAACAATTCCTCGATGATATGTTTACACAAATGGGCCTCACTGTTGTTATCGAAAAAATGATGACGAAAGATAAAATTACATTCCAAGTACACGGCGAAGAGCTAGGTATTTTGATTGGTAAACATGGTCAAACATTGGATGCTATTCAATACTTAACAAATCTCGTGGCTCACAAGGATGTATCTGGCCACTGCCATATCGTGGTAGATGTGGAAAATTATCGTTCTCGCCGAGAAGAAACATTGGTGAATCTCGCGAAACGCTTGGCTTCTAAGGTGAAACGCAATCGT
PROTEIN sequence
Length: 220
MEFIDVSAKTIEDAIAKGVAQLASEGQELVETKVLEQPSSGFLGIGRKPAVVRLFFTALAKSATAEEAANVKEQSVAIASEPVATSETEVQDTAAETSESTVEEKPSKKELSKEDQQEIAEKGKQFLDDMFTQMGLTVVIEKMMTKDKITFQVHGEELGILIGKHGQTLDAIQYLTNLVAHKDVSGHCHIVVDVENYRSRREETLVNLAKRLASKVKRNR