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NECEvent2014_4_5_Veillonella_parvula-rel_38_17_partial

NECEvent2014_4_5_Veillonella_38_17
In projects: NECEvent2014_4_5

Consensus taxonomy: Veillonella  →  Selenomonadales  →  Negativicutes  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 211 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_4149 174_005_scaffold_4149
Species: Veillonella parvula (100%)
1 1043 bp 33.37 27.18 69.03
NECEvent2014_4_5_scaffold_1256 174_005_scaffold_1256
Species: Veillonella parvula (100%)
7 5567 bp 35.19 26.51 95.33
NECEvent2014_4_5_scaffold_2562 174_005_scaffold_2562
Species: Veillonella sp. 3_1_44 (100%)
2 2064 bp 44.14 26.45 90.70
NECEvent2014_4_5_scaffold_3700 174_005_scaffold_3700
Species: Veillonella parvula (100%)
1 1218 bp 46.39 26.35 100.00
NECEvent2014_4_5_scaffold_2000 174_005_scaffold_2000
Species: Veillonella parvula (100%)
4 2909 bp 38.33 26.25 81.37
NECEvent2014_4_5_scaffold_652 174_005_scaffold_652
Genus: Veillonella (81.25%)
16 12086 bp 36.45 25.59 85.42
NECEvent2014_4_5_scaffold_62 174_005_scaffold_62
Species: Veillonella atypica (60%)
50 54418 bp 38.85 25.52 84.04
NECEvent2014_4_5_scaffold_3729 174_005_scaffold_3729
Species: Veillonella parvula (100%)
1 1205 bp 42.82 25.27 90.87
NECEvent2014_4_5_scaffold_849 174_005_scaffold_849
Genus: Veillonella (100%)
10 9311 bp 40.41 25.18 88.83
NECEvent2014_4_5_scaffold_163 174_005_scaffold_163
Genus: Veillonella (96.67%)
30 35245 bp 39.27 25.17 92.33
NECEvent2014_4_5_scaffold_1077 174_005_scaffold_1077
Genus: Veillonella (85.71%)
7 6882 bp 39.73 25.13 78.51
NECEvent2014_4_5_scaffold_857 174_005_scaffold_857
Genus: Veillonella (100%)
9 9216 bp 35.43 25.11 79.23
NECEvent2014_4_5_scaffold_676 174_005_scaffold_676
Genus: Veillonella (100%)
13 11647 bp 38.86 24.92 83.43
NECEvent2014_4_5_scaffold_2856 174_005_scaffold_2856
Species: Veillonella parvula (100%)
2 1768 bp 35.80 24.77 94.68
NECEvent2014_4_5_scaffold_4071 174_005_scaffold_4071
Species: Veillonella sp. 3_1_44 (100%)
1 1067 bp 43.67 24.60 99.81
NECEvent2014_4_5_scaffold_2475 174_005_scaffold_2475
Species: Veillonella parvula (100%)
3 2181 bp 38.79 24.28 97.66
NECEvent2014_4_5_scaffold_3771 174_005_scaffold_3771
Species: Veillonella parvula (100%)
1 1186 bp 40.39 24.16 81.20
NECEvent2014_4_5_scaffold_2465 174_005_scaffold_2465
Species: Veillonella sp. 6_1_27 (66.67%)
3 2195 bp 37.81 23.78 93.49
NECEvent2014_4_5_scaffold_1923 174_005_scaffold_1923
Species: Veillonella parvula (50%)
4 3086 bp 38.11 23.38 92.06
NECEvent2014_4_5_scaffold_3381 174_005_scaffold_3381
Species: Veillonella parvula (100%)
2 1382 bp 37.55 23.34 101.16
NECEvent2014_4_5_scaffold_2894 174_005_scaffold_2894
Species: Veillonella parvula (100%)
1 1733 bp 44.66 23.20 99.88
NECEvent2014_4_5_scaffold_2041 174_005_scaffold_2041
Genus: Veillonella (100%)
3 2818 bp 44.68 23.05 94.11
NECEvent2014_4_5_scaffold_1833 174_005_scaffold_1833
Species: Veillonella parvula (100%)
3 3336 bp 44.00 23.02 96.31
NECEvent2014_4_5_scaffold_4246 174_005_scaffold_4246
Species: Veillonella sp. 3_1_44 (50%)
2 1008 bp 44.44 22.92 91.96
NECEvent2014_4_5_scaffold_2603 174_005_scaffold_2603
Species: Veillonella sp. 3_1_44 (66.67%)
3 2011 bp 37.94 22.82 71.46
NECEvent2014_4_5_scaffold_2955 174_005_scaffold_2955
Species: Veillonella parvula (100%)
2 1666 bp 38.48 22.78 97.78
NECEvent2014_4_5_scaffold_1131 174_005_scaffold_1131
Species: Veillonella sp. HPA0037 (100%)
2 6353 bp 39.71 22.69 86.75
NECEvent2014_4_5_scaffold_3927 174_005_scaffold_3927
Species: Veillonella parvula (100%)
1 1123 bp 39.89 22.44 98.31
NECEvent2014_4_5_scaffold_3724 174_005_scaffold_3724
Species: Veillonella parvula (50%)
2 1207 bp 46.31 22.25 100.17
NECEvent2014_4_5_scaffold_3508 174_005_scaffold_3508
Species: Veillonella parvula (50%)
2 1318 bp 40.82 22.19 96.74
NECEvent2014_4_5_scaffold_3663 174_005_scaffold_3663
Genus: Veillonella (66.67%)
3 1238 bp 38.93 22.17 95.72
NECEvent2014_4_5_scaffold_3129 174_005_scaffold_3129
Species: Veillonella dispar (50%)
2 1528 bp 38.29 21.89 69.31
NECEvent2014_4_5_scaffold_3197 174_005_scaffold_3197
Species: Veillonella parvula (100%)
1 1492 bp 37.60 21.82 98.53
NECEvent2014_4_5_scaffold_122 174_005_scaffold_122
Genus: Veillonella (97.73%)
44 40739 bp 39.35 21.79 82.04
NECEvent2014_4_5_scaffold_228 174_005_scaffold_228
Genus: Veillonella (100%)
21 28412 bp 38.79 21.76 95.40
NECEvent2014_4_5_scaffold_3671 174_005_scaffold_3671
Species: Veillonella parvula (100%)
1 1236 bp 40.78 21.72 97.57
NECEvent2014_4_5_scaffold_1231 174_005_scaffold_1231
Species: Veillonella parvula (66.67%)
6 5710 bp 42.47 21.62 93.99
NECEvent2014_4_5_scaffold_296 174_005_scaffold_296
Genus: Veillonella (88.46%)
26 23571 bp 36.96 21.56 87.01
NECEvent2014_4_5_scaffold_3119 174_005_scaffold_3119
Species: Veillonella dispar (50%)
2 1538 bp 38.30 21.55 83.68
NECEvent2014_4_5_scaffold_82 174_005_scaffold_82
Genus: Veillonella (97.73%)
44 49681 bp 38.12 21.52 83.48
NECEvent2014_4_5_scaffold_303 174_005_scaffold_303
Genus: Veillonella (75%)
12 23032 bp 39.61 21.49 96.14
NECEvent2014_4_5_scaffold_2624 174_005_scaffold_2624
Species: Veillonella parvula (100%)
2 1992 bp 37.00 21.46 74.55
NECEvent2014_4_5_scaffold_2953 174_005_scaffold_2953
Genus: Veillonella (100%)
3 1668 bp 46.04 21.31 99.46
NECEvent2014_4_5_scaffold_1771 174_005_scaffold_1771
Species: Veillonella parvula (100%)
1 3483 bp 41.17 21.23 100.00
NECEvent2014_4_5_scaffold_1438 174_005_scaffold_1438
Species: Veillonella parvula (62.5%)
8 4649 bp 31.19 21.17 80.60
NECEvent2014_4_5_scaffold_3540 174_005_scaffold_3540
Genus: Veillonella (100%)
3 1303 bp 35.23 21.07 68.38
NECEvent2014_4_5_scaffold_2911 174_005_scaffold_2911
Species: Veillonella parvula (66.67%)
3 1715 bp 39.71 20.99 97.78
NECEvent2014_4_5_scaffold_3168 174_005_scaffold_3168
Species: Veillonella parvula (100%)
1 1507 bp 42.47 20.60 99.93
NECEvent2014_4_5_scaffold_3345 174_005_scaffold_3345
Species: Veillonella parvula (100%)
1 1405 bp 43.63 20.50 93.10
NECEvent2014_4_5_scaffold_38 174_005_scaffold_38
Genus: Veillonella (98.51%)
67 68831 bp 37.13 20.32 90.31
Displaying items 1-50 of 211 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.