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NECEvent2014_4_5_Clostridium_perfringens_28_8

NECEvent2014_4_5_Clostridium_perfringens_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_3472 174_005_scaffold_3472
Species: Clostridium perfringens (100%)
1 1334 bp 30.96 6.97 87.26
NECEvent2014_4_5_scaffold_1225 174_005_scaffold_1225
Species: Clostridium perfringens (100%)
5 5747 bp 28.07 9.97 87.23
NECEvent2014_4_5_scaffold_1937 174_005_scaffold_1937
Species: Clostridium perfringens (100%)
3 3050 bp 28.23 6.93 87.15
NECEvent2014_4_5_scaffold_797 174_005_scaffold_797
Species: Clostridium perfringens (100%)
10 10007 bp 28.64 8.77 87.12
NECEvent2014_4_5_scaffold_1762 174_005_scaffold_1762
Species: Clostridium perfringens (100%)
3 3509 bp 27.13 8.98 87.12
NECEvent2014_4_5_scaffold_1916 174_005_scaffold_1916
Species: Clostridium perfringens (100%)
2 3110 bp 29.52 7.91 87.11
NECEvent2014_4_5_scaffold_834 174_005_scaffold_834
Species: Clostridium perfringens (100%)
10 9486 bp 29.48 8.97 87.07
NECEvent2014_4_5_scaffold_458 174_005_scaffold_458
Species: Clostridium perfringens (100%)
15 16493 bp 26.24 7.57 87.06
NECEvent2014_4_5_scaffold_2048 174_005_scaffold_2048
Species: Clostridium perfringens (100%)
3 2809 bp 28.20 7.37 87.04
NECEvent2014_4_5_scaffold_474 174_005_scaffold_474
Species: Clostridium perfringens (100%)
14 16098 bp 29.34 8.86 87.01
NECEvent2014_4_5_scaffold_799 174_005_scaffold_799
Species: Clostridium perfringens (100%)
11 9981 bp 27.90 7.32 86.99
NECEvent2014_4_5_scaffold_1251 174_005_scaffold_1251
Species: Clostridium perfringens (100%)
5 5606 bp 27.20 6.93 86.85
NECEvent2014_4_5_scaffold_2504 174_005_scaffold_2504
Species: Clostridium perfringens (66.67%)
3 2137 bp 24.94 6.60 86.76
NECEvent2014_4_5_scaffold_812 174_005_scaffold_812
Species: Clostridium perfringens (71.43%)
7 9793 bp 28.28 9.31 86.69
NECEvent2014_4_5_scaffold_1832 174_005_scaffold_1832
Species: Clostridium perfringens (80%)
5 3339 bp 27.37 8.13 86.67
NECEvent2014_4_5_scaffold_2341 174_005_scaffold_2341
Species: Clostridium perfringens (100%)
2 2361 bp 27.32 6.48 86.66
NECEvent2014_4_5_scaffold_891 174_005_scaffold_891
Species: Clostridium perfringens (83.33%)
6 8778 bp 30.84 11.18 86.64
NECEvent2014_4_5_scaffold_1932 174_005_scaffold_1932
Species: Clostridium perfringens (80%)
5 3057 bp 25.94 6.04 86.56
NECEvent2014_4_5_scaffold_693 174_005_scaffold_693
Species: Clostridium perfringens (100%)
9 11363 bp 29.43 7.97 86.54
NECEvent2014_4_5_scaffold_1048 174_005_scaffold_1048
Species: Clostridium perfringens (100%)
8 7149 bp 28.66 8.81 86.53
NECEvent2014_4_5_scaffold_2927 174_005_scaffold_2927
Species: Clostridium perfringens (100%)
1 1699 bp 29.66 6.18 86.52
NECEvent2014_4_5_scaffold_4221 174_005_scaffold_4221
Species: Clostridium perfringens (100%)
1 1016 bp 31.30 11.66 86.52
NECEvent2014_4_5_scaffold_1212 174_005_scaffold_1212
Species: Clostridium perfringens (100%)
8 5836 bp 28.38 8.25 86.51
NECEvent2014_4_5_scaffold_1446 174_005_scaffold_1446
Species: Clostridium perfringens (100%)
4 4604 bp 27.04 7.98 86.47
NECEvent2014_4_5_scaffold_3733 174_005_scaffold_3733
Species: Clostridium perfringens (100%)
2 1204 bp 26.91 20.31 86.46
NECEvent2014_4_5_scaffold_1962 174_005_scaffold_1962
Species: Clostridium perfringens (100%)
3 2992 bp 27.44 5.87 86.43
NECEvent2014_4_5_scaffold_1743 174_005_scaffold_1743
Species: Clostridium perfringens (100%)
4 3541 bp 27.70 7.50 86.42
NECEvent2014_4_5_scaffold_591 174_005_scaffold_591
Species: Clostridium perfringens (100%)
16 13177 bp 27.68 7.13 86.40
NECEvent2014_4_5_scaffold_1192 174_005_scaffold_1192
Species: Clostridium perfringens (100%)
4 5937 bp 29.54 8.16 86.36
NECEvent2014_4_5_scaffold_4013 174_005_scaffold_4013
Species: Clostridium perfringens (100%)
1 1088 bp 27.11 6.34 86.31
NECEvent2014_4_5_scaffold_647 174_005_scaffold_647
Species: Clostridium perfringens (75%)
12 12204 bp 30.32 10.23 86.28
NECEvent2014_4_5_scaffold_1572 174_005_scaffold_1572
Species: Clostridium perfringens (100%)
5 4099 bp 28.86 6.33 86.14
NECEvent2014_4_5_scaffold_3028 174_005_scaffold_3028
Species: Clostridium perfringens (100%)
1 1596 bp 27.44 5.83 86.09
NECEvent2014_4_5_scaffold_582 174_005_scaffold_582
Species: Clostridium perfringens (100%)
11 13404 bp 29.48 9.78 86.08
NECEvent2014_4_5_scaffold_700 174_005_scaffold_700
Species: Clostridium perfringens (100%)
12 11286 bp 28.39 7.96 86.07
NECEvent2014_4_5_scaffold_1412 174_005_scaffold_1412
Species: Clostridium perfringens (100%)
3 4748 bp 30.37 8.56 86.06
NECEvent2014_4_5_scaffold_1718 174_005_scaffold_1718
Species: Clostridium perfringens (100%)
3 3655 bp 25.01 6.81 86.02
NECEvent2014_4_5_scaffold_3426 174_005_scaffold_3426
Species: Clostridium perfringens (100%)
1 1357 bp 25.50 7.18 86.00
NECEvent2014_4_5_scaffold_979 174_005_scaffold_979
Species: Clostridium perfringens (100%)
7 7908 bp 29.64 8.55 85.96
NECEvent2014_4_5_scaffold_2159 174_005_scaffold_2159
Species: Clostridium perfringens (100%)
2 2639 bp 26.83 8.07 85.94
NECEvent2014_4_5_scaffold_1539 174_005_scaffold_1539
Species: Clostridium perfringens (100%)
6 4232 bp 26.98 7.94 85.92
NECEvent2014_4_5_scaffold_830 174_005_scaffold_830
Species: Clostridium perfringens (100%)
6 9544 bp 30.93 9.73 85.81
NECEvent2014_4_5_scaffold_1076 174_005_scaffold_1076
Species: Clostridium perfringens (100%)
7 6916 bp 27.95 8.29 85.80
NECEvent2014_4_5_scaffold_1165 174_005_scaffold_1165
Species: Clostridium perfringens (100%)
6 6106 bp 28.89 8.38 85.78
NECEvent2014_4_5_scaffold_3690 174_005_scaffold_3690
Species: Clostridium perfringens (100%)
3 1224 bp 22.63 5.76 85.78
NECEvent2014_4_5_scaffold_4166 174_005_scaffold_4166
Species: Clostridium perfringens (100%)
2 1039 bp 21.37 3.46 85.76
NECEvent2014_4_5_scaffold_2426 174_005_scaffold_2426
Species: Clostridium perfringens (100%)
3 2253 bp 28.45 7.06 85.75
NECEvent2014_4_5_scaffold_1907 174_005_scaffold_1907
Species: Clostridium perfringens (100%)
4 3135 bp 27.75 7.46 85.74
NECEvent2014_4_5_scaffold_905 174_005_scaffold_905
Species: Clostridium perfringens (100%)
8 8632 bp 29.98 9.33 85.74
NECEvent2014_4_5_scaffold_1731 174_005_scaffold_1731
Species: Clostridium perfringens (100%)
2 3605 bp 29.74 8.28 85.71
Displaying items 301-350 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.