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NECEvent2014_4_6_scaffold_1960_2

Organism: NECEvent2014_4_6_Actinomyces_59_150

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(1262..1522)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X750_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 86.0
  • Bit_score: 148
  • Evalue 2.50e-33
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 86.0
  • Bit_score: 148
  • Evalue 3.50e-33
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 86.0
  • Bit_score: 142
  • Evalue 5.00e-32

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGGCACATAAAAAGGGCCTCGGTTCTTCCCGCAACGGTCGCGATTCGAACGCTCAGCGCCTGGGCGTGAAGCGTTTCGGTGGCGAATTCGTCAATGCTGGCGAGATCATTGTCCGTCAGCGCGGCACCCACTTCCATCCCGGACGTAACACCGGCATCGGCAAAGATGACACCATCTTCGCCCTCAAGCCCGGTTCGGTTTCCTTCGGAAAGCGTCGCGACCGTCGCGTCGTCGACGTCGTGGAGTCCGTGTCTGCCTGA
PROTEIN sequence
Length: 87
MAHKKGLGSSRNGRDSNAQRLGVKRFGGEFVNAGEIIVRQRGTHFHPGRNTGIGKDDTIFALKPGSVSFGKRRDRRVVDVVESVSA*