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NECEvent2014_4_6_scaffold_3098_2

Organism: NECEvent2014_4_6_Anaerococcus_vaginalis-rel_30_6

near complete RP 44 / 55 MC: 4 BSCG 41 / 51 ASCG 12 / 38
Location: comp(180..1496)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 857
  • Evalue 7.80e-246
DNA-directed RNA polymerase subunit beta' n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSC9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 857
  • Evalue 5.50e-246
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 438.0
  • Bit_score: 752
  • Evalue 9.20e-215

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Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1317
GTTATAGATATTTGGAGAGAAGCAACTGATGAAGTAACAGCAGCTCTTCTTGATGAATTAAAATCTGACAATAATATTAAAATATTTGCAGATTCTGGAGCCCGTGGTTCTACAAACCAAATTAGGCAATTAGGTGGAATGCGTGGACTTATGTCAAGAGCTGATGGAAAAATCATAGAAATTCCTATAAAGGCAAACTTCCGTGAAGGACTTTCAGTACAAGAATACTTTATTTCAACACACGGTTCTCGTAAAGGACTTACAGATACAGCTTTAAGAACTGCCGATTCAGGATATTTGACAAGAAGAATGGTAGATATTTCTCAAGATGTTATTGTAACAGAAGATGATTGTGGTACAGATGGATATGTAGTTGCTCGTGAATTTAAAGATGGCAACGAATTAATCGAAAATTTATTTACAAGAATTGTAGGACGTACATCATTTGAAGATATTTATGATAATGATGGGGAACTTATAGTTAGTAAAAATCAAATTATTGATGAAGATAAGGCCGACAATATTGTAGCTAATGGAATTAAAGAAGTTAAACTTCGTTCAGTTCTAGAATGTAAATCTAAACATGGCGTTTGTGAAAAATGTTATGGTAGAAACCTTGCTACAGGCAAGAAAGTAAATATTGGAGAGGCTGTAGGAATTATAGCTGCTCAATCAATCGGAGAACCGGGTACTCAGCTTACAATGAGAACCTTCCACTCAGGAGGAATCGCTGGAGTAGGAATTACTCAAGGTCTTCCAAGGGTTGAAGAGTTATTTGAAGCAAGAAAACCAAAAGGACTTGCCTTTATTGCAGAAAACTCTGGAACAGTTTCATTAATTCAAAATGAAAAGAAAACTGATGTTGAAATTTTATCAGAAGATGGATATTCTAAAAAATATAATATTCCATTTGGAGCAAGACTATTAGTATCAGAAGGAGATGTGGTTGAAAAAGGACAACAACTTACAGAAGGTTCCCTTGATCCACACGATGTACTAAAAGTTTTGGGTAAAGTTGGAGTTCAAGATTATATAACCAAAGAAGTTCAAAAAGTTTACAGACTTCAAGGTGTAGAAATTGACGATAGACATATAGAAGTTATTACAAAGCAAATGCTTAAAAAAGTAAAAATAGAAGATGCTGGAGATACAGAATTTTTACCAGGTTCATTGCAAGAAATTAGAGAAGTAAGAATTGCAAATGAACAAATGGAAGAAGAAGGCAAAAAGCCATGTAAATATTCTCAACAACTTCTAGGAATTACAAAAGCATCACTTGCTACAGAATCTTGGTTATCAGCAGCATCTTTCCAATAA
PROTEIN sequence
Length: 439
VIDIWREATDEVTAALLDELKSDNNIKIFADSGARGSTNQIRQLGGMRGLMSRADGKIIEIPIKANFREGLSVQEYFISTHGSRKGLTDTALRTADSGYLTRRMVDISQDVIVTEDDCGTDGYVVAREFKDGNELIENLFTRIVGRTSFEDIYDNDGELIVSKNQIIDEDKADNIVANGIKEVKLRSVLECKSKHGVCEKCYGRNLATGKKVNIGEAVGIIAAQSIGEPGTQLTMRTFHSGGIAGVGITQGLPRVEELFEARKPKGLAFIAENSGTVSLIQNEKKTDVEILSEDGYSKKYNIPFGARLLVSEGDVVEKGQQLTEGSLDPHDVLKVLGKVGVQDYITKEVQKVYRLQGVEIDDRHIEVITKQMLKKVKIEDAGDTEFLPGSLQEIREVRIANEQMEEEGKKPCKYSQQLLGITKASLATESWLSAASFQ*