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NECEvent2014_4_6_scaffold_152_5

Organism: NECEvent2014_4_6_Clostridium_7_2_43FAA-rel_29_12_partial

near complete RP 47 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(5616..6092)

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 154.0
  • Bit_score: 264
  • Evalue 2.10e-68
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBZ0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 275
  • Evalue 4.20e-71
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 275
  • Evalue 5.90e-71

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 477
ATGAGAATAGGATTAGGATACGATGTACATCGTCTAGTTGAAGAAAGAGATCTTATTATAGGCGGGGTAAATATCCCTTATGAAAAAGGTCTGCTTGGACATTCAGATGCAGATGTTCTTCTTCATGCAATAATGGATTCATTGCTAGGTGCCTCTGCTCTTGGCGATATAGGTACACATTTCCCAGATACCGATGAAAAATATAAGGGGGCTTCTAGCATTAAATTATTAGAGGAAGTTGGCAAGCTTTTATATAAAAATGGTTTCTCTATCAATAATATTGATTCAACTATAATAGCTCAAAGGCCAAAAATGTCTCCTCATATAATGAATATGCGTGAAAACATAGCAAAAGCCTTAAATATTGATATTAATAAAATCAATATTAAAGCTACAACTGAGGAAGGTTTAGGCTTTACTGGAACAGGGGAAGGAATCTCTTCTCAAAGTATATGCCTGTTGACAGTTAACAATTAG
PROTEIN sequence
Length: 159
MRIGLGYDVHRLVEERDLIIGGVNIPYEKGLLGHSDADVLLHAIMDSLLGASALGDIGTHFPDTDEKYKGASSIKLLEEVGKLLYKNGFSINNIDSTIIAQRPKMSPHIMNMRENIAKALNIDINKINIKATTEEGLGFTGTGEGISSQSICLLTVNN*